Gene detail

Detailed information of ENSSYXP00000002287.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: CAH3147390.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000002433

CCGATTCCATCATGGCGGCGCACTATAACTTCAAGAAGATTACTGTTGTGCCCTCGGCAAAGGACTTTGTCGACATCGTTCTTTCGAGAACTCAACGGAAAACTCCGACCGTAATTCATCGACACTACAAGATAAGCCGGATTCGTGGTTTTTACATGCGGAAGATCAAATTCACGCAACAGAATTATCATGACAAACTGACGCAGATTATCACAGATTTTCCAAGGCTGGAGGATATCCATCCATTCTATGCTGATTTAATGAACGTGCTCTATGACAAGGATCATTATAAGCTGGCCTTAGGGCAAATTAACACTGCGAGGCATTTGATTGACAACGTTGCCAAGGATTATGTGAGACTCATAAAGTATGGTGACTCATTGTACAGATGTAAACAGTTAAAGCGAGCAGCTCTAGGAAGAATGTGTACCATAATGAAAAGGCAAAATCAGAGTCTGCAATACTTGGAACAAGTTCGTCAGCATGTGGCAAGGCTTCCTTCTATAGATCCAAACACACGAACTCTTCTCGTTTGTGGCTTTCCAAATGTCGGAAAATCAAGTTTTATGAATAAGGTGACAAGAGCAGATGTTGAGGTCCAACCATATGCTTTCACAACCAAGTCTCTGTTTGTTGGTCACATGGACTACAAATACCTCAGATGGCAGGTAGTGGACACTCCAGGAATCCTTGACCACTCACTAGAAGAACGAAATACCATAGAAATGCAGGCTATCACAGCTCTTGCACACCTCAGAGCAGCCATCCTTTACATCATGGATATTTCCGAGCAGTGTGGACACACGCTTGAAGAACAGATTGAGTTGTTTAATGGCATCAAACCTCTCTTTGCTAACAAACCGCTGCTTGTTGTGATGAACAAAGTGGATGTGATTCGACCAGATGAACTGTCGGAAGAAAAGCGAGAGCTACTCAAAGCTTTTGATCAAGACGGAGTAACGCTTCTTCCGATGAGCACAGTCAGTGAAGAAGGCGTGATGACTGTCAAGACTGAAGCCTGTGATCAGCTTTTGGCTCAGAGAGTTGAAGTTAAAATGAAGAGCAAGAAAGCCAAGGACGTTATGAACAGACTTCACGTAGCCATGCCAACACTGCGAGACCAGAAGGAGAGACCGCCATGCATACCTCAGGCTGTGCTAGACAAGCGACAAGCCATGTCAGTGGAAGGAGCCGAGCCCAAGAGAAGACTGGCCAAGGATCTTGAAAATGAACTGGGAGAAGATTACTATATGGACATGCGACAACACTGGGATTTGGCAAAAGACGATGAAAAGCAGGATATTATACCCGAGATCTTCCTCGGGAAAAACGTGGCCGACTTTATTGACCCAGATATCATGaagAAATTGGAAGAACTAGAGAAAGAAGAGGAGCTACGTGAAGCTGCAGGGCTATACGACTCCGAACCGGAAGAATTAGACTCCGAAGAGGAGGACATCAGAAAGAAAGCCGAGCAAATCCGGGAAAAGAAGAAGCTTGTTGTGAAGGCGCATCGAGAGATGAAACCAAGAAACAACAAGGCCAAGCTACCGCGTTCCACGTTTCTTAAGGTTCAGGCCGCGCGCAGCCGGAGAAACGAGACAGAAGATTTGGGAGAAGAAATGGAAGGCATTGAAGAGGGAGACGGGGCAGCGACAAGAACTCGTTCCCAGACTCCAATGAGCCGAAAGAGAAAGAGAGCAACTAGTGGTGGAGAGCGCAGCTTGTCGCGACCACCACGTGACCAGTCAGGCATTGGTTCTCCTGAGaaaaagaagaaagcGAAGAAACTATCCAAGGTTGTTCAGAGAGGCATCAACCGCATGGGCAAAGCAGGAGAAGCAGACCGAAAGATCGCCACGAAAATGCCCAAACACATGTTTGCTGGCAAACGAAAGATGAACAAAATCCAGAGAAGATAGCCTTGAACAGCACGTGCTCACAAGATATATCTACGCcatgttcttgtgaaaaatttTACGTAAAAATAAAACGTGTAGTTCAGCCAAAATTTTTAGTCTGGTGCTTGGAGCGGGAATGTTTGAACAACCCCATGCGAGGCGTTTGGTAACAACATCTTCAGGAAGCTGAGGAAACCATGACGGTAACAGTAACGGTAACGACAATGGTAACGGTAATGGTAACGGTAGCAGTAACGTTAACGACAACGGCAACGGTAGCAGTAACGGTAACGACAACGGTAACGGTAGCAGTAACGGTAACGACAACGGTAATGGTAACGGTAATAGCAACGGTAGCGACAACGGTAACGATAGCGGTAGCGGCAATGGCATGGTTCACGTCACCAAACAAAGAGCATCTCGCCATTAAGAAAGTGagccacgacggctaatttttggtAGATTCTTTTGGAGTTGATCGCAAGTTTTTCGGCAATCGTAGTACCCAACAGATCGAGATAATTGCGATgttgcaaagtaaaataaaaattcatttCTTACTGGGCCTCGTCCCCttcgtcgccgtcgtcattgcttaagaaTCCTAATCACTACTCAGGGAAAGTACCTACAATTTACTAGCATTTCCAAACCGCGCATGTAAATCGGGTGCAATTTTAGTACAATAAGGTCGTGATTTCATCACGCCGCAGATTTCGAACTTAGTAATAGTagtaggactgagtggagtccaattcggtctgtaatcctTCAAGTGATAACAAAGCCAGAAGACCGCGctgcgggagtctgatttgtctatcacagaccgaattggacgacacgaagaaAGGAagaataggggaatccttgtttacaatatttgcctcattaacataagcaattcagtttatgatgaagttacaaataaatcagttctgaatattgaaaggtcatagtacgattaactctgccagtgaatatgagcctgatgtattgaatacttattgtgcaacacgg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99ME9	GTP-binding protein 4 OS=Mus musculus OX=10090 GN=Gtpbp4 PE=1 SV=3
Q9BZE4	GTP-binding protein 4 OS=Homo sapiens OX=9606 GN=GTPBP4 PE=1 SV=3
Q99P77	GTP-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Gtpbp4 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004566 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06858 all species →	NOG1	Nucleolar GTP-binding protein 1 (NOG1)	Family	Interproscan
PF08155 all species →	NOGCT	NOGCT (NUC087) domain	Domain	Interproscan
PF17835 all species →	NOG1_N	NOG1 N-terminal helical domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR010674 all species →	Domain	Nucleolar GTP-binding protein 1, Rossman-fold domain	Interproscan
IPR031167 all species →	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR012973 all species →	Domain	NOG, C-terminal	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan
IPR024926 all species →	Family	Nucleolar GTP-binding protein 1	Interproscan
IPR041623 all species →	Domain	NOG1, N-terminal helical domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45759 all species →	NUCLEOLAR GTP-BINDING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06943	NOG1; nucleolar GTP-binding protein	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.