Gene detail

Detailed information of ENSSYXP00000003841.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_015773742.1, PREDICTED: calnexin-like isoform X2 [Acropora digitifera]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000004010

CGCGTCTGATTTGAATTTTCTGCGCTTTTTTGCGGCTTGGTTCTTCGTTTTTTCCTTCTTgctctttaaaaatttcaaactgtCGATACGACCTCGAAATCTTCAACCTGAGCGTAGTATTTATTCACCATGCGGCTTAAACAGTTGTTCGTGTATCTCGGTCTTGTAGTTCTCCTTTGTTGTACTTTGTCATCACGAGCCGAAGACGATGTTGCGGACGTTGAAGATGAAGACGAAGTAGAAAGCGAGAGCGAACAGGACGATAAGggcaaagagaaaaagaaagtggAAATAGAATCTTATTCACCTCCAGTCATTCCACTTGAACACGAGGACTCGGTATTCTTTGCAGAACCCTTTGCAAAACGAGGAGAGTttgaaagcagGTGGATGAAATCTCAAGCCAAGAAAGATGGAGTTGATGTTGAAATAGCAAAATATGATGGTGAATGGTCATTTGAGGAGCCAGTAACCAAGTTATTCACTGGAGATCTAGgacttattctcaagTCAAAGGCAAGGCACCATGCAATTTCTTCCTTGCTGAAAAAACCATTTGAGTTCAAGGACAAGCCGTTTGTAGTCCAGTATGAAGTGAAATTTCAGCAGGCAATGGAATGTGGTGGTGCTTATGTCAAACTTCTTTCTCATCATGATTCTCTTGACCTgAAATCTTTCCATGACAAGAGTCCTTATACTATTATGTTTGGACCTGACAAATGTGGTGAAGACAAAAAGCTTCACTTCATTTTTAGACACAAGAACCCAAAGACTGGTGAATATGAGGAGAAACATGCAAAGAAGCCAACTGGCAACTTCCAGAGTGTATTTGATGGCAAAAAGACTCATTTATTCACCTTGGTAGTTAGACCTGACAATTCATTTGAAGTGTTTGTGGATCAAGAAAGTGTCAATTCAGGCAACTTGCTGGAAGATTTCACTCCTGCTGTCAACCCCCCTAAAGAGATTGATGACCCACATGATAAAAAACCAGAGGACTGGGATGAGAGAGAGAAGATTCCTGACCCTGATGCAGAGAAACCTGAAGACTGGGATGAGGATGCTCCTGCTAAAATTCCTGACCCTGATGCAAAGAAACCAGAAGACTGGTTAGATGATGAGCCAGGGTATGTTCCTGATCCTAATGGCGTCAAACCTGATGACTgggatgaagaagaagatggcGAGTGGGAAGCACCACAAGTTGCAAACCCTAAATGTGAGAAGAGTGGATGTGGAGAGTGGAAACCTCCTGTCATAGACAATCCTGCTTACAAGGGCAAATGGTCAGCACCACTGATTGATAACCCCAACTACAAGGGTATTTGGAAGccaagaaaaattgaaaatccAGATTACTTTGAGGATAAGGAACCTTTCAAGATGACATCCATTGCTGCTGTTGGTTTAGAGCTCTGGTCCATGACCCCAGATATACTGTTCGACAATTTTATTATCACCAGTGACAAATATGTTGCTGATAAGTGGGCTTCAGAGAGttGGGTGAAGAAAAATGTCAAAGAAACCTATGGAGGAGATGAAGAGggTGGAGTAGTCAGGAACTTGCTGGACGCAACTAATGAGCGGCCATGGCTGTGGGTGCTGTTTGTCATTGTTGTTATTTTGCCATTTGTACTAATTGCTGCTTGCTGTTTCCCTGGAAGCAAGAGTGATGCTgccaagaagaagaaaacagatGAACCAACTGAAGATGTTGTTCCTGAAGAAGACAAGACTGAAACACAAGAAGGAGATGACGAAACACCTGAAGCAGGCGATGAAAAGGCTGAAGAGGAAAATGAAGATGAAGAAAAGGAAGCTGAGGGGAAGGAAGAGGAAGCTGCTGGCAAGGATGAAGCTGCTGGCAAGGATGAGGTTGATGAAGAGGAAAGTGGCAGgaTGAAAACAAGACAAAGAGCAAGAAAGGAGAATTGATCTTTGTCGCAGTTCATGCTACACGGCTCCAGATAATCCAAGACTTAGTTTGGACATTTTCAGTTCTCTCCAAGGCTTGTTACTTTGCAAAGCTCTTTTGATTAGCTTCTTTTCCTTTAGTCATTTAGTTATTAATAATAGTGCTTTAGGCTTATTGGCAAATATTTGGACTGACAGCCCTTTTAACAAGGAATGACCGAAATGGAATCACTGCCACAACTGTTGGAAATTATTTACTCAAAAACTACTTCTCAACTTCAGAACCTTGATTTTAACTGATATCAGAGCTGGCTTTAAATCATATCATAATTAAAATGTACTCAGTGTAATTTTGTCTGACATGGTATTGTATCAGACAAAATTCTGTTACTTTCCTTAGAGGATAAAATGCCAGATCTTTCAGTTGAGGACCACTGGCTTGCACAGTTGTctctaaaaaggaaaaacaacatTTCAGTGATAACTTATGtttttttaacttaatattAGGTACTTAGTTAATTTGCTGTAGGTTATATAGTTTTGGGTCCATCTTTCATTTAGAAAAATTGATATAGAAGAAGGACAGGAAATGAAAAATGGAGTTAATGTCAGTCTTATTCGAGCCTCAAATGTGCAAGTTAAATTAACTAGGAATTGCCAGGGAAAGTGCAGAGTAATCAGACTTGAATTGGATAATAAGTTGTGGTGTGGAAAGCTTGCTGTTCAGTTGTTGTTGAAGAGAGAAATGCCAACCCTCTTGTGGTCCTAAGGTTATTTAGAGCCTTGAGTAGTTCTGTCTCAACTTTCAGCTGCTTGAACTGGAGCATAGAATCAATTGGAACAGTCGTGCTCAGAACAGGTAAATCAAACCCCAGGGCCTCAATATTTCCATCTCGGTTTGGTCCCACAGGCCTTGCACCCTTTGAAAAATGGTGGGAGATTTGATGTAGTCATATGGCTACTACCTAAAATTGAAGTATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14967	Calmegin OS=Homo sapiens OX=9606 GN=CLGN PE=1 SV=1
P35564	Calnexin OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1
P35565	Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005385 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00262 all species →	Calreticulin	Calreticulin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001580 all species →	Family	Calreticulin/calnexin	Interproscan
IPR018124 all species →	Conserved_site	Calreticulin/calnexin, conserved site	Interproscan
IPR009033 all species →	Homologous_superfamily	Calreticulin/calnexin, P domain superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11073 all species →	CALRETICULIN AND CALNEXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08054	CANX; calnexin	-	Lectins	ko04091	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.