Gene detail

Detailed information of ENSSYXP00000004914.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: PFX21521.1, p21-activated protein kinase-interacting protein 1-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSYXT00000005093

CCTTTCGTCAATGGTCGGCCCCTTCCGGACTACATTCGTCATCGGATCGTGCAACTTGCAGCATGTGGTGTCCGACCGTGCGAAATTTCTCGGAGACTTCTGGTGTCACACGGCTGCGTCAGCAAAATCCTGGGAAGATTCTACGAAACAGGCTCTATTCGTCCAGGATCGATAGGGGGAAGCAAGCCAAAGGTTGCCACGCCTCCTGTTGTAACCAAAATTGTGCAGTATAAGCAGCAGAACCCCACCATCTTTGCGTGGGAGATTCGCGATCGCCTCGTCGAAGAAGGCGTTTGTGATAGGGAAAACACTCCCAGCGTCAGTTCCATCAATCGTATTCTCCGGAACAAAGCTGCTGAAAGAGCCGCGCAGTATGCAATGATTGAGCGCGAAAGACAGCATTTAGCCAGCATTTATGGCTTCCATCCTTGGTCCGCCGTTTGCGAGCCAACTATGCCCTGGTCATGCCACACGATGCCGCAGCATGAGGACTTTCCACCTCAGGAATACGAGAGGAGGGGTCTCGAACCACCTCCAGAGTTGTCAATTATTGCATCATCTCAAACTGACAACGACCACCAAGAACATCATGAAGGGACTTTCCCAGTGAGGCTTAAAGGAGAAAATAACGAGGAGCAGCGCCAAAGGCAGTGCGAGACACCAGACAAGGAGATCACAACAccggaaaaagaaaaacctgTTCATGTTCAAAGTATTGATACCGAGCACGACGAAAGCGAACAGATGGAAGAGTTAGAAGTTGACACGCACGAAACAAGCCCACACCACGATGATGACAGCTACGaaaacagaaacaacaacagcGACACCTTTGACACAGACAACAAAAATTTCAATAAGAATCCTGAAAACGCAGGTTACAACAGTGGAAGCGAAAGCGGCAAGGAAGGAAGTGATTCTCAAGGAAACCAGAAGAGAAAAATACGGCGAAACAGAACGACATTTTCCCCTGAACAATTGGAGATGCTTGAAAAAGAATTCGGAAAATCTCATTACCCGGATGTAGCCACGAGGGAGGAGCTTGCGAATAAGATTGACATGTCAGAGGCACGAGTGCAGGTTTGGTTCTCTAATCGCCGCGCAAAATGGCGTCGCCATCAGAAAATAAACAGCTTACCGCATATACGTCACTCGCTACTGGGAGGTTGCTACCCAATGTGCACTGAATGTGACATGGCTGATCAACAGTGTTCCTTGATACAAGGCCCCTACAGTCCACCCCTGAACTCTCTTAGCCTTCTGTCGCCGAACTCACGTGGCAAATCCAACATGGAGGTCATCGTTGGTACTTATGAACAAGTCCTCGTTGGTTTTGACGTCCTCTTCGGTGAAGATGAGCTTGAGTATAGGCTTAAACCGAAATTCGCTGAAAAAGAACACGCTGGCTGCATCAAATGTGCGGCCAATAGCGGTGAATATCTTGCCACTGGTAGCTCTGATGAAACTATAAGGTTATATAATCTCAAAGATCATCGAGAGTTGGGTGCGTTAATGCAACATGAGGGTACCATAACTTGTTTGGCATTTCATAACAGCACTCACATGTTAAGTGGTAGTGAGGATAAGACAATATGTGTTTGGGAGTGCCGCACATGGGACTGCCTTAAAACTTTAAAAGGCCATAGAGGTCATATAAATTCAGTTTCTGTTCATCCATCTGGGAGACTGGCTCTCTCTGTGGCAAAGGACAAGACATTAAGAACATGGAATCTTGTGACAGGCAAATCTGCATATGTTACCAATATCAAGGAAGCTGCCCTTCTTGTGAAGTGGTCCCCTGCTGGGGATAGCTATGCTGTGGCCATTGGAACAAAAGTAGTAGTTTACAAACTTGCTACAGCTGCCTTATCCTTTACAATGGAATTTTCCAGATATGTGTTAGCATTGGAGTTCCTTGTTGCTGTTCATCTCTGCATGACTGAGGATTTGCTGAAAGAAGACACCAGAAGTTTGCTGCTGTTTTCAACATCGTCTGATGGAGATTTAAGAGGCTGGGCCTTCAACCCGGACAACTTTGAAGAAGAAGCTATGCTCGTGACCAGATATCAAGTGCCTGGTAGACCAACATGTTTGACTGTAGTGGGTAGAAGATCGCCTCCCACCAAGGTTGAACCTGCAGCCGAGGCAATGGTTGTGGAACCTGCAGAACCTGTGAAGgagaaaaaggagaaaaagaagaaagagaaaggaaaggctGACAGACGAACAACAAGTACTtcagCTGACGAAcccaagaagaaaaagaacaggACAAAGAATAAAAAGTCTGCTAACAATCGAGCTGGTTCAGGGAAGAAAACAGGAGAAGCAAAAAACACGCCTGAACGGACGAAAGATGAAACGAGTGCCATGGAAGCGAATGAGACTGGGGAAAGCGATGAAGATAATGATGACGGAGAAGACGAGTTGCAAATCTCTTGA

Transcript

ENSSYXT00000005093

Protein

Uniprot

Gene family

Uniprot term	Description
P47238	Paired box protein Pax-6 OS=Coturnix japonica OX=93934 GN=PAX6 PE=2 SV=1
Q1LZF1	Paired box protein Pax-6 OS=Bos taurus OX=9913 GN=PAX6 PE=2 SV=1
P26367	Paired box protein Pax-6 OS=Homo sapiens OX=9606 GN=PAX6 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00292	PAX	'Paired box' domain	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR001523	Domain	Paired domain	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR043182	Domain	Paired DNA-binding domain	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR043565	Family	PAX family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan