Gene detail

Detailed information of ENSSYXP00000006458.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: CAH3169462.1, unnamed protein product, partial [Porites evermanni]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000006739

gattcccatacaaacactgtaatttctgaccgctttgcctacccCCGCACTTTTTCAATCTACTACATACAGGTTCAAGGAACAAATGACCGCGCTACACTAAGCAAGTCTTCTACTGTGTCACAGGGATATTATGAAGACAAATTTCTCCAGTATTTTGTCTCCAAGTCGTCTAGAAGAGCACCGATTATTCATAGGTCATATTACATAAGGGCCAAAGCTATTCATTATATGGTTAAAGGATTTCTACAGAGCTTAACCCTGAAATCTTCACAAAAACAGATTGTTTCTCTGGGAGCTGGATTTGACAcacttttctttttacttgttGGTGAAGGATTTCTGAAAGATACAAAATATTTTGAGGTGGATTTCCCAGAGATTGCCAAACAGAAAACCAATTTAATCCTACAAAAGAAAGAACTATCCCAAGCACTTGGAACAATAACATCCAAAAATGAACAATGGCTTGGAGGAGGTATTGACAGTGAGAGGTATTCTCTACTTGGATGCAACCTAAAGAATCGATTAACATTGGAGAGCAGCCTACTGAAATGTGGACTGGACACCACACTTCCAACACTGCTGCTGTCTGAAGTTGTGCTTACATACATGGACCCTCCACAAAGTTCCACAGCTATTATTGGATGGGCATCGCAGTTCTTCACATCTGCAATGTTTGTAATGTTTGAGCAGGTCATGATGTGTTTGGTTGGCAGGATGAACCATTTTAAGCACTCAGTTGGAGCTCCTTTGCATGCCACAGAAGCTTTTCCAACTCGACAAAGTCAAATCCAACGATTTATGAAAGAGGGCTGGCCTTTGGTCCATTGTCCCACATTGAACTTCTTCTACTATGACGCCTTACCGGAGAAGGAAAAAGCTCGACTGCAAGATCTGGAACCTTTTGATGAGTTTGAGGTGATGATTAAAATGTTCAGATGTAACATTCTCACATTTTTTAGTGGCAACTGCTGGCATGTTCGGATTCGATTGTTGCTGGTTCGATCTGAGCTACGACCAAAGTATACACTGAacaaaagtTTGCCTCACTTGTTCATAACCAGGTTTGGCCACACAGCCACTCCATTGTCTGATAGTGCAGTTCTTCTCACTGGTGGATTTGGTCTTAACAATGGCAAACACATGCGACTTAATGGCGTTCAGTTACTGCGGACTGTTCAAGGTGTTTGGCACTGTACGGACTTGACTTCAGACTCGGAAAGTATACTTGGTGGCCGAATCTTTCACAGTGCAACAAGATTAAACAACGATAATATTTTAATACATGGCGGTCGGACATCCCCGGAAAAACCTTGTGCAGAGACACTTCTGTTATCGCTCAAGGACAAGGATGAATCACAATCTTTAAATGGTATAAACGTTAATTTTAACTGCCGCTCCGAGAGTGGACGTAAAGGCAGTGACGAATTCCAAGATTCTTGTGAAGGGAAAAAGAGTTACAAACATACGATTTTCAGTTGTCAAGGAGATATTCCacaaccaagatggcggcacaGTGCAACACGTATTGTTCTATCTGATGGCAGCGAAAGTGTATTAATATTTGGCGGACGCACTTCAACTTGCCTTGCCCTTGGAGACTGTTATTTACTTGACATAAAATCAAAAACATGGACTAAGGTATTTGGAGATGCCGCTGTACCACGTCATTCCCATACCGCATGCGCATGGAACGGTCATGTAGTACTGGCGGGAGGCTTGGAGGCCAGTCTCCATGCTCTGAACACGGTTCAGATCATAGATATTCAAGTAAACGCCATGACGCTACGGTCGCTACCTATTGATCCACCCTTACCGCCGAGgtACGCACACACGGCTCATGTTGTTGATGACAACCTTTTCCTTCTGGGTGGAGTAACTCCGAACTCTTCCCAGTCTCCTGGGGTAGTTGTTCTTCATCTCAAGTCTCTGTCGTGGAAGTCCTTCACTCTACCGGCGTCCACAGCACCTTCCATGCCTTTGATGCTTCATAATCACCGCAGTGTCTGTTGGGAAGATTCGCAAAGCATCATGGTCCTGGGCGGAGGCGgaaactgtttttcattcgGAACTCATTTGAATGAAGGGCCAGTGTTTATTAACCTTCCTCTGTCTTGA

Transcript

ENSSYXT00000006739

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60294	tRNA wybutosine-synthesizing protein 4 OS=Homo sapiens OX=9606 GN=LCMT2 PE=1 SV=3
Q5XIA3	tRNA wybutosine-synthesizing protein 4 OS=Rattus norvegicus OX=10116 GN=Lcmt2 PE=2 SV=1
Q8BYR1	tRNA wybutosine-synthesizing protein 4 OS=Mus musculus OX=10090 GN=Lcmt2 PE=2 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001733 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13418 all species →	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF04072 all species →	LCM	Leucine carboxyl methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR007213 all species →	Family	Methyltransferase Ppm1/Ppm2/Tcmp	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011043 all species →	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46529 all species →	TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0032259 all species →	Biological Process	methylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008175 all species →	Molecular Function	tRNA methyltransferase activity	Interproscan
GO:0030488 all species →	Biological Process	tRNA methylation	Interproscan
GO:0031591 all species →	Biological Process	wybutosine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000006458.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.