Gene detail

Detailed information of ENSSYXP00000007082.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020606117.1, endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSYXT00000007407

TGAAAAGGATCCAGAATTTATAATTTCCTTTAGGATACAACctgttttcgtttaatttttttcccttaagTTCGTATAAAATATGAATTCCACTCAGCGGGAAGGATCGAGGGAATTCATCTCGGTTTCTATGCCATGGAGAAGTGAAGGTGGCGATGATAACAGCAAAGTTCGACGTCACACTTCGCTTTACCGGaaatgGCGAGCCATGTCTTCATTTCAAAGATACCATGCTGCTGATGAATCTACGCGAGGAATTTCAACAGGCGCGTGACTGGGTTGCCAAGAGCTTAAAGTTTGAGAAGAATGTTGATGTGAATTTATTTGAGACAACCATTCGTGTACTTGGAGGACTTCTAAGTGCTTATCACTTGTCACAAGATGACTTGTTTCTGAAGAAGGCTATTGATCTTGGAGATCGCCTCTTGCCAGGTTTTCAGTCAAGGTCCAATATTCCTTATTCAGATGTAAATCTCCTGACTCATGCTGCACACCCTCCCCGCTGGGGTCCTGATAGTTCTGTGTCAGAGGTGACAACCATACAGCTAGAGTTCAGAGACCTTAGTTACACAACAGGCAATACCAAATACAAGgcagcTGTAGATACAGTGTCAAACCATATCCATGGCCTTCCAAAAAGAGCAGGCTTAGTGCCAATTTTTGTAAATGCTGATACCGGCAGGTTCCGGCCTGCTGCAACAATCACACTGGGTGCCCGTGGTGACAGTTACTATGAATACCTGTTAAAACAGTGGTTACAGAGTGGAAAGACGGAAGACTGGCTTAGAGATGATTTTACACAGTCCATGGATGGAGTCATGTCACTTTTAAAGCGAGAATCCCAGCCCAGCAGGCTGGTGTACATTGGTGAACTTCTTCATGGTCAAACATTTAGCCCTaaaatgGATCACCTGGTATGTTTTCTTCCTGGTACTTTAATGTTAGCCGTCCACAATGGTCTtgacaaaaaatatgaacagtTTGCTAAAGATCTGTTAGAGACCTGTGTGCAGATGTACAAACGGATGCCGACTGGGCTAAGCGCTGAGCTGGTTTACTTCAACCAAGGGCCATCCACACAAGTGCAAGAAGACATCACAGTTAGGCCTTTGGATGCTCATTCTTTGCTGCGACCAGAGACCGTAGAATCTTTATTTATTCTCTACCGCCTCACGGGAGACAAGAAATACCAGGAATATGGCTGGGACATATTTCAGGCCATCGAGAAACACGCCAAAATCTCCACCGGGGGCTACTCGTCTCTAAATAGCGTCAAAGACCCAAAGCAAGGGTTTAGAGACAAAATGGAGAGCTTCTTCCTCGGAGAgactttaaaatatttattcctATTGCTTAGCGATGTGGACGTTGTTCCTCTAGATAAGTTCATATTCAATACAGAGGCTCATTTAGTGCCGATTAGGAAATCTTAACGTGCTAGCTTAATTTTAGGAGTTATTATTgtctacaatcttggacaaaagtCATTGGGACACTGATGTAATGCAacaaattatctgtgttttacagCTCATGTTTGAAAAAACAACACTGTTATCCTTTGAAAAACACGTTGCTGTATCCCCTCAAAACCTTTCATACAAAATTAAGTTTGATTTGGATGAAAATGAATctgtaggcggaacacatttccatatgaatggttcCGCACGAAAACTCGTTTTGGCACAGAGGCAAAAGCCAACTAGTTTTCAACATTATATTCGGGGTTGAGGGATGTTGTTTGTCTGGCATGTGTGCAAAAGcgccaaaagtgcaaatttgtcccaagactttcgtccatgattgtacatgtagattctcgcctgaatttgtaaaaactaGTTGTATTTTAAGTCGGAATAGGGAATGATGTAATTTATATACTTACAATGTAGAAACTTAACGTTTTGTAAGGCtgtgacattttgaacattttactGCTTATTTAAGGTTCACATGTCGTGACTCCCGTCGGTGGAACGTATTCCACGACTTGTCATGCAAAGAAACTGTCACGCTAGATTAGTAGACTGTATTCATTAGGTCACGTTAGTGCTCGTTCACGTAATTTTTGGCGACCATTTTATTCTGGGATCTCCGCAA

Protein

Uniprot

Uniprot term	Description
Q9UKM7	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Homo sapiens OX=9606 GN=MAN1B1 PE=1 SV=2
B2GUY0	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Rattus norvegicus OX=10116 GN=Man1b1 PE=2 SV=2
A2AJ15	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase OS=Mus musculus OX=10090 GN=Man1b1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01532	Glyco_hydro_47	Glycosyl hydrolase family 47	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036026	Homologous_superfamily	Seven-hairpin glycosidases	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR001382	Family	Glycoside hydrolase family 47	Interproscan
IPR050749	Family	Glycosyl Hydrolase Family 47	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11742	MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004571	Molecular Function	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:1904382	Biological Process	mannose trimming involved in glycoprotein ERAD pathway	Interproscan