Gene detail

Detailed information of ENSSYXP00000010216.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: KXK04771.1, excinuclease ABC subunit B [Acidobacteria bacterium OLB17]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q65ST2	UvrABC system protein B OS=Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E) OX=221988 GN=uvrB PE=3 SV=1
P45125	UvrABC system protein B OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=uvrB PE=3 SV=1
P57844	UvrABC system protein B OS=Pasteurella multocida (strain Pm70) OX=272843 GN=uvrB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011532 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12344 all species →	UvrB	Ultra-violet resistance protein B	Family	Interproscan
PF01565 all species →	FAD_binding_4	FAD binding domain	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR004807 all species →	Family	UvrABC system, subunit B	Interproscan
IPR024759 all species →	Domain	UvrB, YAD/RRR-motif-containing domain	Interproscan
IPR006094 all species →	Domain	FAD linked oxidase, N-terminal	Interproscan
IPR036318 all species →	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR016169 all species →	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR016164 all species →	Homologous_superfamily	FAD-linked oxidase-like, C-terminal	Interproscan
IPR016166 all species →	Domain	FAD-binding domain, PCMH-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24029 all species →	UVRABC SYSTEM PROTEIN B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0009380 all species →	Cellular Component	excinuclease repair complex	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000010216.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.