Gene detail

Detailed information of ENSSYXP00000011674.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: CAH3037618.1, unnamed protein product, partial [Pocillopora meandrina]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000012329

ATGTTGAACTCAGTTCTGTATGACAGATTAGGATGGTGGGAAGATTCTGGCTTCCTCACCAAGTTGATATTAGGTCTGCTGTTGACAGTATTGGGGCCAGTATTAGCCCCATGTTATTTCTTGTTGCCCAACAGCCGGATCAGCAGACTCCTACAGAGACCAATGTTCAAGTTTATGAATCACACGGGTTCGTTCTGCCTGTTTCTTATGCTGCTCATTTTGTCCTCGGTTCAAGACAAATTTTATGATGTGCTTCAGTTTCAAATCTTCGATGTCCTTATAACGCTGTGGATCGCTGGTTTGCTGTTCCAAGAGGCAAAAGAAGCTTTCCGTCAAGGAAAAGAGCGCTACTTTTCGCAATACTGGAATTTTGTCACGCTCTTCATGTTGGGAATGTTTGTCATCTCCGGCCTTTTCTGGCTTGCTGGATTTTTCCTGTCTGTGGAGGGCAAGGGGACAGATGCAATTCCTGTCCGTGAAGCATTCGGTAGAAGTGCGAAAGAGTCCGCATACCGCCTGATTCTCCTGTCCAATGCGTTCTTCTCCATCGGTTTGGTCTTGAGCTTCATCAGTGCGTCCAATTCGTTTCAAGTGAACTCCGTTCTCGGTCCGCTGCAGCTGTCGCTTGTGAAGATGATTCGGGACATTGCGAAGTTTCTGttcctgtttctgttgttgtttcttgcaTTTGGTTGGGCGGAAAGGAAGGTGTACTCTCAGTACGTTCAAGCCAGGGAAACCTTTACTGGGAATGCGACTGAACACGAATTTGCCCAGATTGGAGGAAGCCTAAGGTTCTTATTCTGGGATTTGTTTGGATTGTCAGAGCTGTCGGATTTAAGTACAGAGAAGAACTTCATCATCACTCAGTACACTGGCGAAATACTGCTGGGACTGTACAGTATTCTGTCTATTGTGGTCGCCATCAATATGCTGATTGCCATGATGGCGAACTCCTATCAAAGAGTCGCGGACGACGCCGATATTCAGTGGAAATTCTCTAGAACCCGGATGTGGATGCCTTATCTTGATGAAGGCAACGTAATGCCGCCTCCATTCAACCTCATTCCCCCGCCTAAGTTGGTATTTCATCTTTGTAGAAGACTGTGTGCTGGTCCTGCAAGCTGTGTGCGCGGATGCTGTGCTGGTGGAGACGGAGCATCAAAACTGAAAGAGAAGGTCGACATAAAGAAGCGCTGCGTTGTGATGAAGCGCTTGATCCAGCGGTATCTTCTCTCTTTGGAGAAGACAACAAAACAGCCTGTCGCTCTTCCAGAGAGATTGGACGAGCAGGAATTGAAAGATATGATAACTCGGTTACAAGATGCATTGAGAAGACGTGAGGAGAGCAAACATGCTGCTGATGCAATGAAGAGACAAACGAAGctTTTGCTAAACATGGCGGCCCATGCGCTAAGGCGTGAAAGGAGAACTTCGACGTCGTTGTTTGACGTTTTGGAAGCAGCCATGCCAGAAATGTCTCTCTCAGAGGAGGACAACTTCTTTTTAGAAGCCGTTCGCCGAGGAGATTTACGTCAAGTGAAACGATATTTCAGAGGGAAACCTAGCGTTCTTGAAACCGAAGCAGAGAAAATCAGAGACTCCAAACTAGGGAGTTTTGGTCTCATTCTGGCCGCACAACAGGATGACTACGATTTAGTgaagtttttgttatcccaggGATATCGTATCGAGGAACCCCATGCCCGGTCTTGTGCGTGCGATAGCTGTAACGCCATGGGGAGTTTGGAAAAGGCTTTGTACCGTTTGAACGGGTATCGGGCTTTGGCCAGCCCCGTGTACCTGTCATTGTCGTACCTCGCTGACTGCGAAAAGGAAGAACTAACGAATGAGAATTCACGTTCCAATGATCCTGTTTATCAAGCGTTCGTTCTTAATGGAAGGATGGAGCGTCTGGCTCGGGAGGAGTACGAGTTCAAGAAGGATTATTCCAATCTGTCGACCCGTTGTGAGGAGTACGCGGTGGCACTGCTGAATCTGTGCCGAAACATGAAGGAGATCGGCTGTGTGATGACCATGCCTTCCATCAAGGGTCTGGCTCATGTGCAGGTCAGGACGGCCAACAAGGCAGCGCTGAAACTAACTGTGCTGAACTTCGCCATCAAGAATAAGAACGAGAGGTTTGTAGCTCATCCCTACTCTCAACTCATGCTCAACGCGGTGTTATATCAAGACTTTGACGAGCATTGGATTTATCGACGAACTATTACCAAAGTTTTCTTTGTATTGCTCTACATGATCTTGCTGCCATTATGGTCTGTTGTTTATCTCTTAACACCGCATAACAAACTGTCCCAGAAGTTGGCTACTCCTCTGGCCAAATTCCTCAGTCATACGTGCTCCTTTTGCTGGTTTCTgatcattttggttttgtccTCTGTACAAGACACGTTGGGAATCTCACTACTGCAAGTTTCCTGGATAGACATCTTGACTGGTCTTTGGGTGTTAGGCATTTCCTTTGAAGAGATGAAGGAGTTTTACAGGCAAGGAAGAGAACGCTACTTTGCCCAGTGGTGGAATTTTGTCACTATTTTAATGCTTGTCTTCTTTTACCTGGCGGGAATATTCTGGCTCCTGGGCTCATCAGCGTTATCAGTTGACGAGGACACATATTCACTGAAATACATCCTTAAAAACATCACAAGAGATTCAGCTTTTCGCTTCTTGCTTCTTTCTAACAGCTTTTTCTCCGTGGCATTCTTGGTGAGCTTTTTTCACTTGTCTAACTCGTTTCAAGTCAATAGTGATATTGGTCCTCTGCAGCTGTCGTTGATGAAGATGTGTCAAGATGTGGGCaagttcttgttgttgtttcttttggttttcttgtcattttccATGGCCGTTCGTAAAGTTTACTCGCAGTTTGAACAGATCATAGATCTGTATCCTGCTACGACGAAAAAAGTTAGAGCTGCTCACGAGTTCTCTGGCTTCTCAGCTGGCCTAAGGAAACTGTTCTGGGCGTTGTTTGACAAGACAGACTTGGAAGCTTTTGAGATCAACTCAAGCACATTCCATGTTACTCAGACCACTGGGGAGACCTTGTTTGCCTTTTTCAATATCGTCGCCATTTTGATCTCGCTTAACATGCTCATTGCCATGATGTCAAACTCTTTTCAACAAATAGCGGATGCTGCTGACATTCAGTGGAAGTTTTCTAGAACAGGCATGTGGATGCAGTACGTTGACAAGGGCAGTGTCGTTCCACCGCCGTTTAACCTTCTGCCTAGCGGGAAGTATTTCATTGAATTGTGCAAACGCTGTTACGACAGGATAAAATATCAAAAGAGAGAACATTATGATGACCTGGCGTCGAGTGAAGAAGTTATTGAAGAAGACGAGGATACGCTTGAGCGTGACAAAGTCCTGAAGAACCTCATCGATCGGTACTTTTTCAGTTCTCGTCAGGCAAGAGAACGACTTCTACTCAAAAATGCACTTAGAGCTTTTGACGATCAGTTCCAGGACGAATCGTCGACAGCCAAGGACTCGTCACCAGCTTCTGAAGAACAAAAGCCCAAAACGTTAGGATGGCTGAGTCGCTTTCAACAAAACtaa

Transcript

ENSSYXT00000012329

AGTTTGTAGCTCACCCCTACAGCCAGCTGATGTTGAACTCAGTTCTGTATGACAGATTAGGATGGTGGGAAGATTCTGGCTTCCTCACCAAGTTGATATTAGGTCTGCTGTTGACAGTATTGGGGCCAGTATTAGCCCCATGTTATTTCTTGTTGCCCAACAGCCGGATCAGCAGACTCCTACAGAGACCAATGTTCAAGTTTATGAATCACACGGGTTCGTTCTGCCTGTTTCTTATGCTGCTCATTTTGTCCTCGGTTCAAGACAAATTTTATGATGTGCTTCAGTTTCAAATCTTCGATGTCCTTATAACGCTGTGGATCGCTGGTTTGCTGTTCCAAGAGGCAAAAGAAGCTTTCCGTCAAGGAAAAGAGCGCTACTTTTCGCAATACTGGAATTTTGTCACGCTCTTCATGTTGGGAATGTTTGTCATCTCCGGCCTTTTCTGGCTTGCTGGATTTTTCCTGTCTGTGGAGGGCAAGGGGACAGATGCAATTCCTGTCCGTGAAGCATTCGGTAGAAGTGCGAAAGAGTCCGCATACCGCCTGATTCTCCTGTCCAATGCGTTCTTCTCCATCGGTTTGGTCTTGAGCTTCATCAGTGCGTCCAATTCGTTTCAAGTGAACTCCGTTCTCGGTCCGCTGCAGCTGTCGCTTGTGAAGATGATTCGGGACATTGCGAAGTTTCTGttcctgtttctgttgttgtttcttgcaTTTGGTTGGGCGGAAAGGAAGGTGTACTCTCAGTACGTTCAAGCCAGGGAAACCTTTACTGGGAATGCGACTGAACACGAATTTGCCCAGATTGGAGGAAGCCTAAGGTTCTTATTCTGGGATTTGTTTGGATTGTCAGAGCTGTCGGATTTAAGTACAGAGAAGAACTTCATCATCACTCAGTACACTGGCGAAATACTGCTGGGACTGTACAGTATTCTGTCTATTGTGGTCGCCATCAATATGCTGATTGCCATGATGGCGAACTCCTATCAAAGAGTCGCGGACGACGCCGATATTCAGTGGAAATTCTCTAGAACCCGGATGTGGATGCCTTATCTTGATGAAGGCAACGTAATGCCGCCTCCATTCAACCTCATTCCCCCGCCTAAGTTGGTATTTCATCTTTGTAGAAGACTGTGTGCTGGTCCTGCAAGCTGTGTGCGCGGATGCTGTGCTGGTGGAGACGGAGCATCAAAACTGAAAGAGAAGGTCGACATAAAGAAGCGCTGCGTTGTGATGAAGCGCTTGATCCAGCGGTATCTTCTCTCTTTGGAGAAGACAACAAAACAGCCTGTCGCTCTTCCAGAGAGATTGGACGAGCAGGAATTGAAAGATATGATAACTCGGTTACAAGATGCATTGAGAAGACGTGAGGAGAGCAAACATGCTGCTGATGCAATGAAGAGACAAACGAAGctTTTGCTAAACATGGCGGCCCATGCGCTAAGGCGTGAAAGGAGAACTTCGACGTCGTTGTTTGACGTTTTGGAAGCAGCCATGCCAGAAATGTCTCTCTCAGAGGAGGACAACTTCTTTTTAGAAGCCGTTCGCCGAGGAGATTTACGTCAAGTGAAACGATATTTCAGAGGGAAACCTAGCGTTCTTGAAACCGAAGCAGAGAAAATCAGAGACTCCAAACTAGGGAGTTTTGGTCTCATTCTGGCCGCACAACAGGATGACTACGATTTAGTgaagtttttgttatcccaggGATATCGTATCGAGGAACCCCATGCCCGGTCTTGTGCGTGCGATAGCTGTAACGCCATGGGGAGTTTGGAAAAGGCTTTGTACCGTTTGAACGGGTATCGGGCTTTGGCCAGCCCCGTGTACCTGTCATTGTCGTACCTCGCTGACTGCGAAAAGGAAGAACTAACGAATGAGAATTCACGTTCCAATGATCCTGTTTATCAAGCGTTCGTTCTTAATGGAAGGATGGAGCGTCTGGCTCGGGAGGAGTACGAGTTCAAGAAGGATTATTCCAATCTGTCGACCCGTTGTGAGGAGTACGCGGTGGCACTGCTGAATCTGTGCCGAAACATGAAGGAGATCGGCTGTGTGATGACCATGCCTTCCATCAAGGGTCTGGCTCATGTGCAGGTCAGGACGGCCAACAAGGCAGCGCTGAAACTAACTGTGCTGAACTTCGCCATCAAGAATAAGAACGAGAGGTTTGTAGCTCATCCCTACTCTCAACTCATGCTCAACGCGGTGTTATATCAAGACTTTGACGAGCATTGGATTTATCGACGAACTATTACCAAAGTTTTCTTTGTATTGCTCTACATGATCTTGCTGCCATTATGGTCTGTTGTTTATCTCTTAACACCGCATAACAAACTGTCCCAGAAGTTGGCTACTCCTCTGGCCAAATTCCTCAGTCATACGTGCTCCTTTTGCTGGTTTCTgatcattttggttttgtccTCTGTACAAGACACGTTGGGAATCTCACTACTGCAAGTTTCCTGGATAGACATCTTGACTGGTCTTTGGGTGTTAGGCATTTCCTTTGAAGAGATGAAGGAGTTTTACAGGCAAGGAAGAGAACGCTACTTTGCCCAGTGGTGGAATTTTGTCACTATTTTAATGCTTGTCTTCTTTTACCTGGCGGGAATATTCTGGCTCCTGGGCTCATCAGCGTTATCAGTTGACGAGGACACATATTCACTGAAATACATCCTTAAAAACATCACAAGAGATTCAGCTTTTCGCTTCTTGCTTCTTTCTAACAGCTTTTTCTCCGTGGCATTCTTGGTGAGCTTTTTTCACTTGTCTAACTCGTTTCAAGTCAATAGTGATATTGGTCCTCTGCAGCTGTCGTTGATGAAGATGTGTCAAGATGTGGGCaagttcttgttgttgtttcttttggttttcttgtcattttccATGGCCGTTCGTAAAGTTTACTCGCAGTTTGAACAGATCATAGATCTGTATCCTGCTACGACGAAAAAAGTTAGAGCTGCTCACGAGTTCTCTGGCTTCTCAGCTGGCCTAAGGAAACTGTTCTGGGCGTTGTTTGACAAGACAGACTTGGAAGCTTTTGAGATCAACTCAAGCACATTCCATGTTACTCAGACCACTGGGGAGACCTTGTTTGCCTTTTTCAATATCGTCGCCATTTTGATCTCGCTTAACATGCTCATTGCCATGATGTCAAACTCTTTTCAACAAATAGCGGATGCTGCTGACATTCAGTGGAAGTTTTCTAGAACAGGCATGTGGATGCAGTACGTTGACAAGGGCAGTGTCGTTCCACCGCCGTTTAACCTTCTGCCTAGCGGGAAGTATTTCATTGAATTGTGCAAACGCTGTTACGACAGGATAAAATATCAAAAGAGAGAACATTATGATGACCTGGCGTCGAGTGAAGAAGTTATTGAAGAAGACGAGGATACGCTTGAGCGTGACAAAGTCCTGAAGAACCTCATCGATCGGTACTTTTTCAGTTCTCGTCAGGCAAGAGAACGACTTCTACTCAAAAATGCACTTAGAGCTTTTGACGATCAGTTCCAGGACGAATCGTCGACAGCCAAGGACTCGTCACCAGCTTCTGAAGAACAAAAGCCCAAAACGTTAGGATGGCTGAGTCGCTTTCAACAAAACtaaaaccctttttttttcagtacagTAACAAAAATAACGTGCGTAATACCAGTAGATTAAAGAACTTGTTTAGTCATtggttataaggtgaagttacAAGTATCGTGTTGAATTGTTCCTCATCAAAGGATCTCAAAGTGATCTCGTGCCATTTGGTTTAGTCTTTTAATTGGTCGCATGACCTGTTATGTCCACGTGACTTCAACAAGGTTTCTTACGGTACGTTTACGAGACAGTGATGTTCATACTATTTCGTTTAGAAATTTTTATGAATTCTTTTATCTCAAGCCAGATTCACATTGCAGCTTGGGACTGTTTATTCCTTTTAGCTTGGCTCCTTTCACTGGTTTTGATGTCAGAGGTAGCGAATTTATTTAGCGTGTTCGGTTTTGTACTGGTTTCAAACGCGCATTAAAAGGAAATACTCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P34586	Transient-receptor-potential-like protein OS=Caenorhabditis elegans OX=6239 GN=trp-1 PE=2 SV=3
Q9Y210	Short transient receptor potential channel 6 OS=Homo sapiens OX=9606 GN=TRPC6 PE=1 SV=1
Q9WVC5	Short transient receptor potential channel 7 OS=Mus musculus OX=10090 GN=Trpc7 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001051 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08344 all species →	TRP_2	Transient receptor ion channel II	Family	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002153 all species →	Family	Transient receptor potential channel, canonical	Interproscan
IPR013555 all species →	Domain	Transient receptor ion channel domain	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10117 all species →	TRANSIENT RECEPTOR POTENTIAL CHANNEL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005262 all species →	Molecular Function	calcium channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015279 all species →	Molecular Function	store-operated calcium channel activity	Interproscan
GO:0034703 all species →	Cellular Component	cation channel complex	Interproscan
GO:0051480 all species →	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan
GO:0070679 all species →	Molecular Function	inositol 1,4,5 trisphosphate binding	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04986	PKD2; polycystin 2	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.