Gene detail

Detailed information of ENSSYXP00000011837.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: CAH3164419.1, unnamed protein product, partial [Porites lobata]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

ENSSYXT00000012492

ATGGTTTTAGTCAGAGATCAACCAGCTGGATATTTACGGAAGGAAACCATCAAAATGAGGCGTCTCTCTCAGACATGGAAGCAAAAGAGAACGTCAGACCGAAGTCAACATGTCATCAAACAAAGAATTTCCAACGTCCACCATGAACGGAAGAATGAAAAGGATAATCAAATGGTGAATGCACCATCTCCAAGTGCTTCATTCAACTTGTCATTTGGCTTTGAGTTTGATGCTGCTGATTTTTCAGAAGTTGACAAAATGGTTGAGCAACATCTCCATTATGATCAGGTGCCACGGTCCCCCCTCACATCTTCCAATGATGTCTTTAAAGGAAATGTTACTCCTACGCTACAAGTAGCTGGACCATTAACCAACAACAAGAAAAGTGGATCTGCAACAAACAAGTTTGGCCGTGCCAGGGAACACATCTCGACACCAATTGAAGATTCAGAGCGTATGGCGCTGTTTTCTTCTGCTCATTCTCCGGTGTTTTCACCTGTCACTGGTGCTTTTCAACAGTTTGAAAATAGTGCTGGCAGATCCCAAGCTAGAAGAAGCAGCTTTGAAAATCCTTCTGGCCATCCAAACAAATGTCACCTCTCCAGTGGCCTGTCAGAGTCCCACAGCAGGAGTGTCCTGGACCCTGATGTGAGTAGCTCAGGGAACCCCTTGGAGCTTTCTTCCTGGGGTCTGCCTCCTGAGGTGCTGAGGAAATACAACGAGCTTGGAATAACTCATATGTTCGAGTGGCAGGCTGAATGCCTTCGCACAGGAAAGGTACTCACTGGGGGTAACTTGGTTTACTCGGCTCCGACAAGTGCAGGCAAGACAATGGTTGCAGAGCTGTTGATGTTAAAACGAGTGTTGGAAACAAAGAGAAAAGCGCTCTTTATTCTGCCTTTCATTAGCGTGGCGCGTGAGAAAATGTTTTATCTCCAGcgTCTTTACCAAGAGGCAGGGGTGCGGGTAGAGGGGTACATGGGCAGCCACGCCCCACCCGGGGGCTTTGTTTCTGTTGACATTGCAGTGTGCACGATAGAGAAAGCCAACAGCCTGCTTAATCGTCTGCTGGAGGAGAATAAAGCTCTGTCTTCTCTGGGAATTGTAGTCGTGGATGAAATGCACATGATTGGCGATTCACACAGAGGATATTTACTCGAACTGTTTTTGACCAAGATACGATACATCGCAGGCTGTAACGGCGAAGAAACGTCGCCAGCGATACAAATAGTCGGCATGAGCGCGACTTTACCCAACCTGGACATGCTCGCCAAGTGGTTGTCCGCTGACTTGTACTTCACGGACCACAGGCCTGTTCCACTGACGGAAATGGTCAAAGTAGGATCGACACTCTATGACGCTAACATGGAGAAGATTCGAGAAATCAGTGCTGGAACGGTTAAAGGGGACGAAGATCATGTGATACCCCTGTGTAAGGAAACCATCGTCGACGGGCACTCGGTCTTAGTCTTCTGCCCGACAAAAAACTGGTGTGAAAAACTAGCTGAGACTATCGCCAAGCATTTTGCGGAAATTGGAAACTTGTCTCCTCAGGAGGGGAATAACAACAATGTTCAGGGTGGTGGGTTTGTGAAAGCATCTGCGCTCGTCACGTTTGATTACGCCGCGCTGAGGGAGGTCATAGAACAGTTAAAACGCACCCAAGTAGGACTGGACTCGATGCTGTCTCGTATGGTTCCACATGGAGTGGCATTTCATCACGCAGGGCTCACTTTTGATGAGAGGGACATTATAGAAGGGGCCTTTAGGCAGGGGTCCATTCGCGTGCTCGTGGCGACCTCAACGCTATCTTCAGGAGTAAATCTTCCCGCTCGTCGTGTTATCATTCGCACGCCAATGTTTCATGGCAAGCTAGTGGATGCTCTGATCTATAAACAGATGGCTGGCCGCGCAGGCCGCAAAGGAGTCGATGCCCTGGGCGAGAGTGTACTGATGTGTAAACCCGCTGAACGACAAAAAGCGGCTTCGCTGTTGAATTCTCGACTTAAAGCTGTGCAAAGTTGTTTGCTAGGTAAGAATGCTGTTAACGTTTGGTTAGAGGAATTTAACGAGGTTCTGGATAAACGTGTCCTGTGGGATTTAATTAAATATAGGATACGTCAGTGTACTATTAAGTATAGTAAAACTAAGGCTcgtcaaagaaaagaaaaattgcagGAGGTTGAGGAATGTATAAAAGAATGTTCACATAAATGTGACAAGGATCCCTCTCCGCAAAACCTTGAACAATTAGAATCTCTCCAGGCAGAATACGAGAACTTGTACGACTTTATTACACAGGGAGCTATCATACGTTTTCGTGCAACTTGGTACGAAATGGGGGAGAGAAATAACATACTTTCTCAATCTTGA

Transcript

ENSSYXT00000012492

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75417	DNA polymerase theta OS=Homo sapiens OX=9606 GN=POLQ PE=1 SV=2
Q8CGS6	DNA polymerase theta OS=Mus musculus OX=10090 GN=Polq PE=1 SV=2
O18475	DNA polymerase theta OS=Drosophila melanogaster OX=7227 GN=PolQ PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004235 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF20470 all species →	HTH_61	Helix-turn-helix domain	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR002298 all species →	Family	DNA polymerase A	Interproscan
IPR046931 all species →	Domain	DNA polymerase theta-like, helix-turn-helix domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10133 all species →	DNA POLYMERASE I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006261 all species →	Biological Process	DNA-templated DNA replication	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0097681 all species →	Biological Process	double-strand break repair via alternative nonhomologous end joining	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000011837.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.