Gene detail

Detailed information of ENSSYXP00000016408.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020618832.1, uncharacterized protein LOC110056659 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSYXT00000017251

ATGGCTCATAAGGTAAACCACAACCTATCAATGGTGAATATAATTGAAAAACAAACGTTGAACAAGTCAGAAACGCCTGTCGTGCAACTTCCCAGATCTGAGGTTGACACTTTCGTTTTTGTAATCTTTTCCGTCCTACTCGCCTTTGCAATTGTCCTCGGCAACTCGATTGTGATGGCCGCTTTTAAGCACAGtcgaaaattacgaaaaaggAGCAACATGTTCTTAATCAGCCTGGCTTGCTCTGACTGCGTCGTGGGCTTTTTTTTCGCTGCATGGCTGCCGTTTTACGTGCTTTTAATGACCGCTGTATACTGTTTCCGTTGCTTGCCGCAATATCCCGGCCTTCAGCGTTTGGTGGACTTTGTGAAGTGGATGCATTATTCGAACAGCGCTGTCAATCCGTTTATTTATGCGTTCAGGGATCCCGAAATGAAGCGAGAATTTGTGGACACGGTGGTGTTTTCATCGATATTTCTGTCTGTTGTTTGCCTTTCGGGATTGATCCACGTCGAGATCGAACTTCACCGTCATCGACAAATGCTTCAAGCCTTGAATCAACAAAGAGAAGAAAAGCTCGAGCTACGAAACACAGCACACGAAGACAAAGAATCTGTGATGAAATTGCTTCACAGTGACATAGAGAAAGAGCAACATGTTCGTTACAAACGCCGCGTGGtaagaaaaatttcaaatgCCAGTGAAACCATTGACCTTGACGTCATCAGAAGAGAAGTACGACTTGCCCTGAGTACCCAGGCCTGCAAGGGAACTAAAGGAATTCAAGGACCCCAGGGAATTCAGGGACCTCCTGCCTGGTTTTTGTGTGAAGCTGAAGGAAACCCAGAACCTAAAATCACGTGGATGAAACAGAATTCCAATCTTCTCGCGGACAAACGAGTTGTACTGTCACGCGGTGGTTTCATGATAACTACAGTGAAGTCACAAGATGAGGGAATGTACACTTGTGTAGCAAGAAATATTCTTGGAGAAAAGAAGTCATCGGCCACTTTATCTGTTCAATTGCAAGTTGGCGCCATGATTTCTCGGAAGCCATCATCTGTTACCATTGAAGAAGGACAGAACCTGAGCCTTGTCTGCAAAGCTACTGGTCAGCCGACTCCAACGGTCACGTGGCGTAAAGCGTTTACTCAACTGCCAAAAGGGAAAACTACAGTTGTTGCTGGTAACCTAAACATAGTAAATATCGCAAAAGCAGACAGTGGTACTTACAAATGCGCGGTTAAAAATCTCCTTGGTGCAGATTCCGCTATCGCTCAAGTGACAGTGATTGACGAACTCAAATTTATCCTAACTCCTCCAGTAAAAGTTGTTGCGTCTGTTTACAATAATGCCAAATTTAATTGTATCGCTGAGGGTTCAGTAGACATAGATTGGAAGAGATCAGGACAAAATCTTCTTCAAAATCACGTGGTTTATCCAAACGGAACTTTGCTTCTTCGAAGCGTTTCCTCAAGAGACGCTGGTGCTTACATTTGCGTAGCAAAAAATTCCCAGCGCTCTATCGAGGTAACATCTGCTCTTGAAGTGTTCAATACACCTATGTCGTGCAGCAAAATAAAATCTGGTCGGAGTGGAAGCTCTTCTGGTAATTATGCGATTGACCCTGATGGCAAAGGAGGCGTGACTCCCTTCAGTGTGTACTGTGACATGAGTGACAAGGGCGGAGTTGGCGTGACGGTCATCAGTCATGACAGTGAGAGTAGAACTCACGTTGGTAACATTCCCGGATGTGATGTAGGAAATCTAGGATGTTACAGTAAAGATGTGCGATACACTGGAGTCAGCACCGCTCAGCTAGCAGCACTCACTCGAGTCTCACAGAACTGTGAACAGTTTATCAAGTTTGAATGTCATTATCGCATAGCTTTTATTGTAGAAGGTGATGCTTGGTTGGTGTCACGTGATGGAAAAAATATGACCTACTGGGGCGGAGCTACGGGACATGACAAGATGTGCGCATGCGGAGTAACAAACTCTTGTTCAAATGGTAAAAATTGCAATTGCCATAACAGTGGTGAATATGTTTGGAGAGAGGACAGCGGCCTGTTGACAGACAAGTCTGCTCTGCCTGTGACACAAATCAGACTGGGAGACTTGGATGATTCAGGCGAAGAAGGATATCATACATTAGGAAAACTCAAGTGTTATGGCCAAGCATAG

Transcript

ENSSYXT00000017251

Protein

Uniprot

Uniprot term	Description
Q9VN14	Contactin OS=Drosophila melanogaster OX=7227 GN=Cont PE=1 SV=2
Q9NR99	Matrix-remodeling-associated protein 5 OS=Homo sapiens OX=9606 GN=MXRA5 PE=1 SV=3
O94856	Neurofascin OS=Homo sapiens OX=9606 GN=NFASC PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan