Gene detail

Detailed information of ENSSYXP00000016771.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: CAH3043215.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

ENSSYXT00000017621

ATGCTTTCCACGAGTGTTCAAGCAGCAAGGGGATTTCAGCGAGCTTTTTCTAAAGTTTGCTCTCAGAAAGCTTTTCTCTCCCAGGGAATACTGTCGAGCTGTGGGATTATGAGGAGTCAGTCGCGGAAACACTTGAGCTTTCGTGATTTTTCAAGGTGTGCAGTCTTATCGCAGCTAGATCCCCAGAAACTGAGAGATGCGTGGGGAAAACCTTCCTTCGACGTGGCCCAAATGACGCACTTGCTAGATCACGACAATCACGAAAAGAGAGCGAAATTTCGGAAAATTTTGTCAGAGGATCCCCTCATGACCCCTAAGTACAACATCTCTGTGGATGAAGAGAGAGACTTGGCACTAAAGAGACTAAAGAAACTTTGCGACCAAGGATTTATTTCGGTGTTGGACTTTAAGAACAATCCTCTGTGGATCTTTGCTGCTCATGAGCTGGCAGCTGTAGTAGATGCTGCCATGACCACAAAGATGACAGTCCAGTTCAACTTGTTTGGTGGCACTGTCTTGAAACTGGGGACAGAGAGACATCATGACAAACTGTTGAAGGGTATTGACTCCCTTGAGGATGTGGGATGCTTTGGTCTGACAGAACTTGGCTATGGTAACAATGCAGTTCAGATGGAAACAACAGCGACATATGACAAGGAAACCAAGGAATTTATCGTCAATACTCCAACCCCACTGGCACAGAAATACTGGATCACAAACGGCGCTTGTCATGCCCACCATATTATTGTGTTTTCTCAGCTTTACATTGATGGTGTCAATCAAGGTATTCATGGTATTCTGGTTCCTATTCGAGACAAAAATCTCAACGTGATCCCTGGAGTCCAGATTCATGACATGGGACATAAAATGGGTCTGAACGGAGTAGACAATGCCAAGTTTTTCTTTGACAATGTTCGTGTGCCCAGAGAAAACCTGATAAACCAGTATTCTGATGTTGCTGAGGATGGAACCTACACTACAAAAATTAAAGGTGGCATCAGAAATCGTTTTCTTGCAGTCGCTGATCAACTTCTCTCTGGTCGCCTGTGTATAGCCAGCATGGCCCAAGGTGCATCAAAAGCCTGCCTCGCCATTGCCCTTCGCTACTCTGCGACTCGTCTGACTGTAGGGCCTGATGGGAAATCTGATACTCCCATTCTGAAATACCAGCTTCAGCAAAATGCACTGATGCCACTGTTGGCAACTACCTATGCTATTGAATTTGCCCTGCAGTATGTCAAGGATCGCTGGGCTTTTCAGGCTGCAGATGGGTCTGATCATGCAGATGTGGTGACAATGTGTTGTGTTATCAAGGCCATTGCTGGCTGGCATGTGGCAGAGACAGCTACTGTTTGCCGTGAGAGGTGTGGTGGGCAAGGTTATCTGTCATGCAACAAGTTTGGCATTGATGCGGCCCTGTCACACGCTTGTATGACAGCAGAAGGTGACAACTCAGTCCTTATGCAAAAGGTAGCTACCGAAAGGCTGATGGCTTTCAAGCCTACTGAACGTCAAGTTGCAGGAGGTGACGAGGCAGACCTGAACAACCAGGAGTATCTCCATTCCTTGTTGGAGTCACGTGAGAACAAACTTTTCATATCTCTTGggatgaagatgaagaaagcAGGGAAGGAGGGAAGGTTTGACACCTGGATGTACCAGGAGCAGGATCTTGTCCAGGCAGCTGCTCACGCATATGGTGAGCGGCTCATCAGTGAGTCCTTTGGCAAAGCCCTTGATAAAGCTGAGCCTGGTCTACAGCCAGTTCTGAAGAAACTTCATCATCTCTATCAGATGTCAGTCATCAAAAAAGATCTTGGCTACTTCACAACCTCTGAGCTGATTTCTACAGTCACTGGTTTAAAAGTAGGGAAAGCAGCTGCTGATCTGTGTCGAGATGTAGCACCACAAGCTCTTGCCCTCTGTGATGCTTTTGGCATCACTGATGAAATGCTAAATGCTCCGATTGCAAGAGACTGGGTGGAGTATAATGCAGTGGACAACCAAGGAGAAGTTGAAGGCCTGAACCAACGTGCCTTTTATGCGATGTACTCCGAGTGGGTTTCTTTGCGAAACACGCTACAGCGTGACCGCAAGAATAGAAGCGTTTTGCACAACTTTCCTCCCTCCGTGGGAAGAGATGTTGCACACACGATTGTCAAGACTCTTGTTCAACCTGGAGCTCAAGAGCAAATGTCGCTTCGCACAGAGAGGGAAGTTGACTGGGTCATGGATGTCCTTTGTTATGGCTTGACACTTCAAATGACAGAAAGCGATGGCGAGATCGTGAAAGGTTGTGTCAGTATCTACCTAGACTGGATCTCGGTCTTGGCAAATGCTAAGAAAGGGATTCCCGAACCGCTTCTAAAGGCGCCCGAGAGATACGCGAAAGAAATCTTTCAACATTTTCGTAACCTTTTTGTGCGAAGGGAAGAAGGAAATCTAGCTTTGCAAGCTTCTTTGTGTATCAGAGTGTTGCAGGTGATTCAAGCTACAGCCTCAGAGGCTAAGATGTCACCCTTGACGTGGGAGGCATTACTGAAGTTTTTGATGATTATTAATGACATGCTTCTGTCACCGCCAAACACTTCAGGAGGTCTCGCAGAACACTTGTGCGAGAAATTGATCAGTGTTTTGCTGGAAGTGTGGTTGCATGCCAGCTGTCATCATTTTCCTGCCCCCTCAATGTGGAAGACTTTGCACGAGCTTTGCATTTCATGGCGGCATCACAATTCAATGATTGACTATTGGAGTAGAACATCCCTAGCTCTCACGAAAAGGGTAATACAGTTTATGTACGGCCCCAGCTTTCCTCTTCCTCTACTGCCATCCAGAAAGAGTGATGTCCGCCTGCCAGCCAACATTGGTGATGAATGCCTCATTCAGTGCTGGttcagaattcttcatattgtTGGGAATCCCGTGGACCTCTGCAAGAAAGAGATTATTAGTAATACACCAAAATTCAAAGAGTTTGCATTGTCAAGTGAAGAAGTGATCACGCCATCAGCTCATCCCTGCTTGAAGACACTTCCACAAAACTTCTTGCAAGCAATGAAAGGCGCGGCAGTTCTCGTTAACGCCTTCCTGGCCATTACAACAACTGTGGAGGAACCAGTGAAACACATACCAATACCAGCACCAACGAAAACCGCAAGCCCTCCAGTGGCCAAGAAACGTGACCAGAAGTCCTTGAGCATTGGCTTAGCCCTGGGTTTAACTGATTCCTCGGGACTAATATATAGATCCCAAACTCTTCCATCTCGACCTAGCAGTGGTACCGCATCCACTGGGCTGCCACATTTAGAGCCATTCCGTGAAGAACTGTCCAGCACACCTTCAACTTCATTTTTGTTCCCAAGATCACCTCTGCCTGACACTCGTAAACCATCAGGGGATAGTGTGCTCCATTTGTTTGGTGGCTGGCTTTTTGAGGCTATATTTGCCAAGCTGGACATGACAGCAAACTTCAACGCTCTGGGAAACATCTATGACAGCTTTGTTACAAATTCTGCCCCAGCTGAAAACACAGGAGTGACCAAGGCAGGTGTAGGGATGGTTAGCCACACAATGGACAGTAGGTTTGAGCCAGGCAGGGCTGAAGCTTATGGCGCACTATGTCGGATCTTTTGTAGTCATCGCTCTGGTCAAGAGGTCCGACCTGTTTACCTGTCAAGGTTTTATTTAGCTTTGGCAATTGGATTGTTGTACTCAGAGTCCTGTACTGGTCATGTACTCTGCAGCATATTGCTGAACTCAGCTGACCTGTTAAGAGTGGATCTGCAAGGGGTGCAAGTGTTGTTACCGCACCTGATCACTGCTCTAGAGACTGTGCTGCCAAGAAATGACATCCAGATAGGGTGTAATGCGCCCACTACTGAACTTCGCAGAGCAGCCATCCATTTGCTGTTATCTATGCTGTGCTTGCCACTGCATTTTCAGGATCTTGCTATAAAAGACATGACTGCAGGATGGAGAAAGAAGCATACTGGCaaccaaagcaatgatgaaccACAGCCTCTGACATTCATCTCCTTAAAGCCCCGACTCATACGACTGCTGCTGGAAGCTCTTCAGTGTGAATCAGACTCGTTCAATGTTCAGATATTGTTGGGAGGTGTGTCTCTGCTAATTCAAGACAGTGAGATTGCCGAGACCCTTGGGGTCTCTTCCCCCAAACAAACTGATTCCACTGTAAGGGTGAGTGATCAGTTGCAGCCTTCACAGGACAGCAGGCGTCGTGCCAGCACTGGTAGCAGCTCAGTGTCTGACGCAGGCAGTGCTAATGAAGTGGACAGTGACAGCAGAGTCCAATACAATCACTCTTTTAACAAGTCATATGACCTCTCGACAGTGCAGGGTCTGTTTGTTCAGTTAACACATCTCCTGTGTAACAAGCTGGTCGTGATTCGAAGCAGTCGCTGGAAATCTGACGTTCACATCACCCTGGCTGCCTTTGAGCTGCTGTCTGGCCTGGCAAAACTGAGCATGCACCATTTGGATCAAGCTGAATGCAAGAGTACAATTCATTGGCTGTGTGACTATGTCACATATCAAGCCAATAAGAAGGCAACACATCACTCACGTGACCTTCACTCCATGATTGTGGCAGCGTTTAGCTGTCTTCAGTCCTGGATAATGTCGCATCCGTGGCTATTGGACAGTCAGgGTTGCTTGAACGTTGTCATGGAAGTGGTAGAATTGGGAATTTCAGGAAGCAAATCCAGGGAAATTCCAAGAGTAACCGATAAATTAACATTTAATACGCTGCCAATTTTAGGTGACAAAGAGTTGAAGCCTGTTTCATTCCGAGTACGAGAAGCTGCTGAAGGATTACTGATGGTCATCATGGAACACTTGGTATGCTATCACTCTTTTGTGACTATTGAGCTTGCTAACTATGTGATAAATATGAAGTGTTCTCACGAGCGAGCGACAAAGAACATACAAGAGTCcccaacgggattcaaacccatgacctctcgGCCAGATTTAACCACTGACTTACGACGAGACTCGGGTTGA

Transcript

ENSSYXT00000017621

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86X10	Ral GTPase-activating protein subunit beta OS=Homo sapiens OX=9606 GN=RALGAPB PE=1 SV=1
P86410	Ral GTPase-activating protein subunit beta OS=Rattus norvegicus OX=10116 GN=Ralgapb PE=1 SV=1
Q8BQZ4	Ral GTPase-activating protein subunit beta OS=Mus musculus OX=10090 GN=Ralgapb PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002628 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20412 all species →	RALGAPB_N	RALGAPB N-terminal domain	Domain	Interproscan
PF02770 all species →	Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	Domain	Interproscan
PF01756 all species →	ACOX	Acyl-CoA oxidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039930 all species →	Family	Ral GTPase-activating protein subunit beta	Interproscan
IPR046859 all species →	Domain	Ral GTPase-activating protein subunit alpha/beta, N-terminal domain	Interproscan
IPR006091 all species →	Domain	Acyl-CoA oxidase/dehydrogenase, middle domain	Interproscan
IPR036250 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR009100 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR046373 all species →	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan
IPR002655 all species →	Domain	Acyl-CoA oxidase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21344 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0090630 all species →	Biological Process	activation of GTPase activity	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0003997 all species →	Molecular Function	acyl-CoA oxidase activity	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0006635 all species →	Biological Process	fatty acid beta-oxidation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000016771.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.