Gene detail

Detailed information of ENSSYXP00000018581.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020631355.1, uncharacterized protein LOC110068320 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSYXT00000019577

CTTCGCGTGATGGCTCAAAGTAGGAGTTTTTTCGATGATGTTAAAAGGGAATTAGAATGTTCTGTATGCCAAGAGCAGTTTAGTGAAACTAATGAACCGAAAATATTGAAATGTCTTCACACTTTCTGCAAATCGTGTCTGAAAGCTTGGCTGCGACAGCAGGGTGGAGGAGCTTTGAGTTGTCCAACCTGTCGACGGGAAGATTCACCACACTGTGGAAACTGCGATGAAAGAAAGTCGTTGAAGTTCTATTTACGGTTTTACTGTGAAAAGTGCGTGATATGCATTTGTCGTGACTGCGCCATATTGGATCATCGAGACCACAACATCGTTTCGCTTGACAACGGATTGCAAAAGAAGAAATCAGAAATTGAGAATAAGATGCGGGAGGTCCAGGCAAATGTTCCTCGTTTGAGGAACGAAAGAGAATCCCTTGAAAAAACGGCCGAACGCAACATAGAATTGATTCGCCAGCATGAAGCAAGCGTGATCGAGCGACTAATGAAGCAGAAAGAAACTTTCGATGCTGCATTTTCAAACACAACGACCGACTTAGACGAAAAACTGGTTGAAATGGAGAGCAGCTTGGACTTTGGCAACGAAGTACTTCAACGAAATAATTTACCAGAGATTCTAAACGTGGAAGAAGTGCTTGAACGGAGGTTTCAGGAGCTTATGAAGCCATGCGCATTTAACTTGAAGGTAAATTATTCCGCGGTCAAGTACGTAGCAATCGACTTGTCGTCCCTGAAAGATTCACCGGGGAAGATACTTACGACAAACACCGAACCTTCCTTGACAATAGTAGATGGCATGGGCCTGACGGAGGGTGTACAAGGCCAGGATTGCACTTTCACAGTGATTACAGTTGATTCACAGGGAAATAAAACCTACAGTGAAATTGACGGCAGAGTTGAAGTTTGCATCCAGTCTCTTCAGACGAGAGAAACCGTCAAGGCCACCATAACAGACTCACAAGATGGCTGCTATAAAGTATCATATACGCCTGAGGCTACCGGAGAGTTCAATGTAGCCATAACAGTGGCGGGCGAAGCTATCAAGGGAAGTCCCTTCCAGttgaaagtgaaagaaatcaagGGAAGACTGAAGAAAGTAAGACGGTACGGGGTAGAGTCGCCAGGTATCTtatataccacacaataCCCCCTTCCACCCACCCACCTATTTCAAAACGTGCTCCTATTATTTGCTCCCATCACCCAATATAAAGTTTTCAGTGAGACGATTAAGAGGTTTCATTATGTCATGGcgaatttgaatttgatcattttAGTCGCCATAAGAACGGTGGAACACTCCCCTTACACTTTAAGTGGTGCAAGTCCACAAGCATCGCTGTTTGCTGCAGGTGATCCACGAGCAAAACAGCTGTTCAAAGAAGTTGGCTTTGCCAAAGATGGCTATACTGACGAAAATTACATCACCATAATTGTCTGCGGCATCCCACCTTCTACTGACAAGGACGCTGTGATAAATTACTTTGAGAATTCAAGACGATCTGGTGGAGGTGAAGTTTCTAGTATTGTTTTTACTGACGAAGGAGATGCCACAATAACTTTTCTTGCGGTGAAAGATTTAGAACGACTGATTAAGAAGCCACATGCAATTGATGGAAAAGTTCTAACAGTCGTGCGCCAGCTTCCCAAGAAGTTTCCACCTGACCCAGTTAAAGTTCATGTACAGGGTATCAGCGAAGCGACCACTGAAGACTGTTTACGGGTTTACTTGGAGAAGTTCAGTAACGTTGAAGTCGTGGAAGTGTATCTTGGTTGCAGCAATGACGCCCTTGCAACTTTTGAATCTGAACCAGACTTTGAATCGCTATTCTGCAAAGTAAGCAAAGATAAGAAAGGTATCGAAGGAAGGAAACCTCGCTTGGTCCGTGTGCCTATCTGCTCATGTATTCTGGTAACAGggttgaaaaaagaaacaaccgACGACACTATAGCActgtattttgaaaatgaaaaacggAGTGGAGGAAAAAACGTCAGCCATGTGGAAAGAAAAGGAGAAGACCAAGCCTTGGTGTATTTTGAGGATCCTTCAAGTGTTCAAAATGTCATGATCAGGTGTCAAACAAATGGCCATACCCTTGAGCTTGAGGGACAAGACTTGAAAGTGAAGCCGCACTACCCTTTCTTTGAAGATACAGCAACGAAGAATACGGAGATCCCGTTTGACCCGAAACAATATAATATATTCAGATAA

Transcript

ENSSYXT00000019577

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan
IPR034464	Domain	PARP-10, RNA recognition motif 1 and 2	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan