Detailed information of ENSSYXP00000018586.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020620158.1, pre-mRNA-processing factor 39-like [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4KLU2Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1
Q8K2Z2Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3
Q86UA1Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003066 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13428
all species →		TPR_14Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17204
all species →		PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000243
all species →		Cellular Componentcommitment complexInterproscan
GO:0000395
all species →		Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0005685
all species →		Cellular ComponentU1 snRNPInterproscan
GO:0030627
all species →		Molecular Functionpre-mRNA 5'-splice site bindingInterproscan
GO:0071004
all species →		Cellular ComponentU2-type prespliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSYXP00000018586.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP