Gene detail

Detailed information of ENSSYXP00000018889.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: CAH3141189.1, unnamed protein product [Pocillopora meandrina]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000019919

ATGTTTCGCGGATTCTTGCATTTCCTAAGCCTTCGACAAAATGGTTTAAAGGCAATTGGACCGTCATGTTTTCGCAACTTAGAAGGAATTCAAACGATTGACCTCGGCAAAAATAAGTTGGCTTCGCTACCTCAAAATCTGTTTCAAGGGTTAAGTTCTTTGCTAAACATTATTCTTGGATCTAACAACTTAAACGTCATCGAACAAACACTATTTAAAGGCCTGAATAAGATTAAGAGGATTACGCTAGACCACAACAACCTGCATTCTATTCCAAACGGGTTGTTCAGTTCATTAAGCACCCTGGAATTTTTGAATTTAGCTTCTAACAACATCAGAGAAATTGAGGACAACCCTTTGCCAAAAGATTCTGCTTTGCAAGTGCTTTACCTCGACAAGAACAAGCTGTCTTCCTTTCCCCCGTGGATATTCCTACTGAGAAAAATCAAAGTAATTGATTTATCGTCTAATCAAATAACTTTTCAAGCTCTTAACAAGGCGTTAGATGATTATGACATACCGCTGGATGACCCGCTGGAAAACGGGGAACCGCCGATAGTTCTTAATTTGTCCAACAACAATATCACCACATTAGTAGATTCCGATGGGTTGCACAGGATAAAACAGGACGAGAAGATCTCTCCAATCCGACTAGCCAAGTATACTTATCTGTGGAAAGCATACGAAATCAAACTGAGTGGAAATCCTTTAGTTTGCGATTGTATCATGTCTGCTGTCGCACAAGAAATTGGAAAATTGTTGCAGGAAACTGGTTTGATACAATCGCGGTTTGAAACTTGGCAATGTCATTGGCCACTTGagctaaaaaacaaatcgattcTTGAAATAAGAGAAGGCCAGTGGCTGAAGAGAGAGACTGAGCTTGAAGATCGCAATTGTCCCACAGGATGCACCTGCCGGGAACGCTGCTCCGATGGAATAATAGTCGTTGATTGCGAGAACAAGAATCTTACAGAATTACCAGGCTTAATGCCACAAGGCCTTATTGAATTGAACTTGATAAGCAATGATATCCGGGATATTCCAGCATATCCTTATTTGGCAAACGTGACTGTTCTGAAACTGACAAACAACAAAGTTGAGCTGCTGAAAGCCTCCACAGTGGAGAAATTAAAACGCGTCGAGACTTTGCTCGTTGATGTTAATAAACTGACGACTCTACCCAGGGAAATTGAATCTCTAAATTTTACAATGTTGGCGTTGGAGCAAAACTTGTTTAAATGCGACTGTACGACTAAATGGATGAAGCGCTGGCTGGTGAAGAATAGACGTCGAGTAAGAAACATTGAAAAGGTGTTGTGTAACTCAGAGCATGCTCTTGGCCAAGCAATTTACAGTTTACCGGACGACGAGTTTATCTGTGCTTCCACTGAGGAAAAGAGCGCAGGAAAGATGGTACCTATGGAAACCATAGCAGCCTCTACCCTTGGTGGTCTGTTAGCTTTGATACTGATTGTTGGTATCATTTTGTATAAATACCATAGAGAAGTCAAAGTGTTCATGTACACCCGTTTCAACAGGCACCCGTTTGATCGCATTGATGACTCGGATCCAAATAAGATTTACGACGCCTTTGTATCGTTCAACGGGAATGACTTTGACTGGGTCGTCAACACGTTACAAGAACGACTAGAAAATCACGACCCCCCTTATAAACTATGCTTTCACCACCGCGACTTTCCAGCTGGAGCTCCAATcgtggaaaacatttttaaaagcgTGGATCAAAGCAAACGAATGCTAGTAGTGTTATCTTCCAGCTACGCAAAGAGCGATTGGTGTTTGATGGAATTTCGTGAAGCCCATCGAAAAGTGTTGGAAGATCGCATGAAATACCTGATAGTTATTCTGTTTGATGATGTGGACACGACAGAACTGGATGAGGAATTTAAGTTGTACCTGCGAACCAACACGTATTTGAGTGTAAGTGACAAGAGGTTCTGGGAAAAGCTGTATTACGCGATGCCTCTTCCTTCGACGACGGAACCAGGTGATAGAAGTCTCGATAACTCTGCAGAAACATTACAACAACAAGAGATGGAGATGGCTCATAGCGCAGTAAACACCACTGTACTTGTTGAATAG

Transcript

ENSSYXT00000019919

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VUN0	Toll-like receptor 6 OS=Drosophila melanogaster OX=7227 GN=Toll-6 PE=1 SV=1
Q7KIN0	Toll-like receptor 7 OS=Drosophila melanogaster OX=7227 GN=Toll-7 PE=1 SV=1
B6ZK77	Interleukin-1 receptor accessory protein-like 1-B OS=Danio rerio OX=7955 GN=il1rapl1b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002891 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01582 all species →	TIR	TIR domain	Family	Interproscan
PF13306 all species →	LRR_5	BspA type Leucine rich repeat region (6 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000157 all species →	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan
IPR035897 all species →	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR017241 all species →	Family	Toll-like receptor	Interproscan
IPR026906 all species →	Repeat	BspA-type LRR region	Interproscan
IPR000483 all species →	Domain	Cysteine-rich flanking region, C-terminal	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24365 all species →	TOLL-LIKE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0002224 all species →	Biological Process	toll-like receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006954 all species →	Biological Process	inflammatory response	Interproscan
GO:0006955 all species →	Biological Process	immune response	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18809	TL; protein toll	-	Toll and Imd signaling pathway	ko04624	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.