Gene detail

Detailed information of ENSSYXP00000019515.1 in Micromussa lordhowensis

Genomic Location: chr6:1503340...1531985
NR annotation: XP_020618250.1, RNA polymerase II-associated factor 1 homolog, partial [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4U0S5	RNA polymerase II-associated factor 1 homolog OS=Danio rerio OX=7955 GN=paf1 PE=1 SV=1
Q8N7H5	RNA polymerase II-associated factor 1 homolog OS=Homo sapiens OX=9606 GN=PAF1 PE=1 SV=2
Q2KJ14	RNA polymerase II-associated factor 1 homolog OS=Bos taurus OX=9913 GN=PAF1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006697 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03985 all species →	Paf1	Paf1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007133 all species →	Family	RNA polymerase II associated factor Paf1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23188 all species →	RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593 all species →	Cellular Component	Cdc73/Paf1 complex	Interproscan
GO:0000993 all species →	Molecular Function	RNA polymerase II complex binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000019515.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.