Gene detail

Detailed information of ENSSYXP00000022034.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020609457.1, MAGUK p55 subfamily member 6-like isoform X2 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000023256

cTTAGGTTGACTTACTCAAGCAATTTTTACTAAATATCGCCTAAAGGCTATGGACCTATTAGTACCCCCGGATTGGTTGTGTTTTTGTTACACAGTGCACGTGACCTTTTCCGGTTCGTTTGATTGGCATGTTCCTCAACCACATCGAAGCGAACGAAGCGTCCTTTTGCAGGGCCTGCAACCTTCCTGCCTTCCTACCTTCCAAACTTCCTGCAAATCTTTGACTTGAAACCCCCTAAAAATGGTAGTGCTAACCGAATCAGAACAGGAGCAGAACTCTCAAGCAGTGGAGACTGTGTTAAAGTCACTTGATGATCCACAGACAGCAGGTCTTATCCTTGAGGAACAGGCAAATGCTTTGAAAAGTATTCTCGGTGATGCTTCTGTTTTGAAACTAATCAGGGCACATGAGAAACTTGAAGAAGGTCGCAAGCAAGTGGAAACACAAGACACTGCTGAGCTTGCAATAGAGGTTAACACTGATCTTGAGCCTGAAGTTGCAAGTGATGACAGTGCTGCCGAGTTGTCTGGCCTCCTGCAGGACCCACATTTCATGGCACTATTAGAAGTTCATGATGCTGTTGCATTTAAGACATACGCTTCACCTCCTCCTTCTCCTGGCATCATAGATGAGCCTGGAACAGTGAATGGTGTAGGGggtcagccaatcagaatggtCGGTCTGCATAAACAACCTAACAAACCACTGGGAATGACATTGGTTGTTGAAAAAGGAGATCTTGTTGTTGCTAGAATCATTCATGGAGGGATGATTGACAGACAAGGTCTACTTCATGTTGGTGATAAAATAAAAGAAGTGAACGGAAGAGATATGAGTGGAAATCCTAAAGAGCTTCAAGATTTACTGcgTGAATCCATGGGCAAGATCTTTCTCAAAGTTGTTCCCACAAATCTGGAGTCACCTGCTTTGAGTCAGGTATTTGTTCGTGCTCATTTTGACTATAACCCTGAAAAAGACAGCATGATCCCATGTCAAGATGCTGGCCTTTCCTTCAAGAATGGTGATGTACTGCAGATTGTTGAACAGGATGATCCCAATTGGTGGCAAgCAAAGAGAACCAATGGCTCTCATGAGGCAGGAATTATTCCAAGTCAAATCTGTGAGGAGAGGAGAAGATCATTTGTTAAGAAAGACAGGCCTGGCAGTGGATTTTTGTGTGGTGgtaaaaagaagcaaaaagttATGTACAAGTCGGCAAAAAATGCTGACTTTGATAGACACGAAATGACTATTTATGAAGAAGTTGCCAAGATGCCACCATTTCACCGCAAGACACTGGTGCTTGTGGGTGCTCAAGGTGTAGGTAGAAGAACACTGAAGAACAGGATGATCCTGTCTGACAGGTCCAGATTTGGTACCACCATTCCCCACACAACACGTGAGCCAAAAGAAGGTGAAGAAAATGGTAAAGGTTACCACTTTGCAAGCCGTGAAGAAGTGGAGTCAGACATCAGGGCTGGAAAGTATCTTGAGCATGGAGACTACGAAGGAAACCTATATGGGACTAAGGTCGATAGCATTCGTGATGTCATGCGCTCAGGAAAGATGTGCATTCTGGATGTTAACCCTACGGCACTGAAGATCCTCAAGACGCCAGAATTTATGCCCTATGTAGTATTTATTGCCTCTCCACCAATTGATACTCTGGTGGAGATTCATAAGCGTGCTACATCAGAGGGCACTATTACCAAGAAACAAACTGATGAAGATCTACAAAGGACTGTGGAGGATTCTGAGAAACTGTACACCAGCTATGCACATTATTTTGATAAGGTTATTGTGAATGAAAACCTAGATGATGCATTGAATGAACTCAAGAAATGCATTGACGCACTCAGCACTGAGCCACAATGGGTACCAGTCAGCTGGGTCTACTAATATTCAGTCAAGAGAAGTTTACTGAGAGAATTCTCAATATCATAAAATGAGCATTATAAATTGAAAGCCAGGCGATTCAAGGCTGGAATATTTTTTACTCAGGAGACATACATATTGCTTTGATTCATTAAAATTGTTTGATTTTCTCTCAATATTCCATATATTAGTTAACATTTTTAACCAATGGGGCAACAGGCACTATTGAGGCATGGATGTAAGAGGCTGCTAAGCACAAAGAATGCATAACAGTTGCTTGAGGTGATAGTCTTGAGAGCTACTCTTATtaagtgcttagcaaacctcccaagtacTTCCGTAACTAATAGTGCTTGCTACACCATTTACCATTTTGTCTTGCAATATCAACAGAATGCAAACCAAACAACCATAACCAAACCTCAAAACTTAGACACTGATGTTGTGTTGTTGTGTGCACTCTTGCTTCAAAGAATTCTCACTTAAATGTGTTTAGGCCTACTAAATTATTTTCTCTCAAGGTTTGTGTAGATTTTGAAACTTTCTTTTGTTGCTACCTTAACAACATTTCTACATTTTCTAGCAATTTGGctcaaaactttggaaaaccTGGctgtaaaatacatgtatctgtacTTAAGTGAGCATTAGCTATGGTCAGCGTGTGGGCAGATAGGACATGccaaattgaccaatcagagcatgtgCTAAATACTTTGAAATGCCCGTGTTCTGATAAAGCTAAGAAGAATCACAAGGTCTACAGTGAggtataataaataataaatcagtCTCCAGTTTTCCCAGCTGAGTAGTTAAACTCATGAGCCtggatattttttggaac

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NZW5	Protein PALS2 OS=Homo sapiens OX=9606 GN=PALS2 PE=1 SV=2
Q9JLB0	Protein PALS2 OS=Mus musculus OX=10090 GN=Pals2 PE=1 SV=1
D3ZAA9	MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000787 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00625 all species →	Guanylate_kin	Guanylate kinase	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF07653 all species →	SH3_2	Variant SH3 domain	Domain	Interproscan
PF02828 all species →	L27	L27 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR008145 all species →	Domain	Guanylate kinase/L-type calcium channel beta subunit	Interproscan
IPR036892 all species →	Homologous_superfamily	L27 domain superfamily	Interproscan
IPR008144 all species →	Domain	Guanylate kinase-like domain	Interproscan
IPR050716 all species →	Family	Membrane-associated guanylate kinase	Interproscan
IPR004172 all species →	Domain	L27 domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR014775 all species →	Domain	L27 domain, C-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23122 all species →	MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005911 all species →	Cellular Component	cell-cell junction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000022034.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.