Gene detail

Detailed information of ENSSYXP00000022577.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020612965.1, omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Orbicella faveolata]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000023830

CTGTTTTAGAAATTCTGCCAATGTTGAATCTTTCGGTCGTTTGCAAGTCTGTTGAATTTCCCTCTGCTTTTGACAGTCACCTTGAGTGACCTTCATCCACGCGACCTTGAACAACACGCGCTTTCCTCGCTTCTGGTTGGTTGTTAACCGTGAATGGAAAATTTTTCTTAAAGATGCTACCGCCAGACTAACACACCGGCCACCAGATAGAAGCTTCAAAACAACCTTTGTGGTTTTTTGTTTAGACATTTTAGTTTAGAGTTTAGGTTCGTCGGCGGAAAAGTTTTGAACACTTCACCATGCCAGAAAGTTACGCAACACTCAACAAGACTCCTCGCCCGACCACTGACCCGCCATTTACGCTGAAGGAACTGAAAGCCGCCATTCCTGCTCATTGTTTTGAGAGATCCACGTTCAAGTCGTTTACTTACGTCGCTTTCGATTTAACCATGGCGTTGATTCTGTTTTTAAGTACAGGGTATTTCAGCCATCCGTATTTACCGCCATGGGCCTCGTACATTCTCTGGCCGGTATATTGGGTCTGCCAAGGTTGTGTTTGCACTGGCATATGGGTCTTAGCCCACGAGTGTGGCCACTACTCGTTTTCGGATAACAAGACAGTCTGTGACTTCACTGGGCTTGCGTTACACACCGCCCTTCTTGTGCCGTACCATTCCTGGCGAATTAGTCACGCAAAACACCACAGAAGCACAAACGACATGGACCGCGACGAAGTGTTTGTCCCCAGCACAAAAGATGAGTTCAGAAAAGGATGTTTGGGAGCTCTTTCTCCTTCATGGAACGTTTTAAACCTGCTGAAACTGTCCTTATTCGGTTGGCCTGCGTATCTTCTGTTCCATGTCACAGGCCGAAAATATCACACACATACTGATCACTTCAACCCCAATAGCCCAATTTTCAGCGGCAAAGATTACAGAGACGTGATAATTAGCGACGTCGCACTGGTGGCGTGGATCGGTTTCCTTGGTTACCTGGCTTATGTTAATACCGTGTTGTGGCTAGTGAAAGTCTATATCATTCCGTATCTCATAGTGAACTTCTGGTTGGTATTTATTACCGACTTGCAGCATTCCGACGCTGCTGTGCCTCATTACAGAGGAGAGCAGTGGAATTGGCTTAAGGGAGCGCTATGTACGGTTGATCGAGACTATGGAATTTTGAATTACGTCTTTCATCATATCGGCGACACGCATATTGCCCATCACCTGTTCTCATACATGCCACATTACCACGCGGTGGAGGCAACCAGGCATCTGAAAAAAGCTTTAGGAGAGTTTTATTACGAAGATAACACACCGATATTCAAGGCCATGTGGTTGACTGGGAGATACTGCCGTTATGTTGAAAACTCAGGTGACATTCTGTGGTATAAACATGATTAATTTATGTTTTTTGTCGGTGTCTTCTTTGTTATTGATGATTATAATCCATAAAATATTTCCGCTCGCgcgtgattggtctaaacgcgtcataTGACTGAACATTACCCGGCTGGGcaatatccgagtgatattccccaatttttttaattattgttttttttttaatgtagctataatatttaatattaatcCTTTCAATACCGAAACATTTTTCTGctgatttccatacatttctttccaTCTCAGTTATGAGAATTTGGTTATTCATCATAGCAATATGTCAATATGTCAATCAGGTCCTTGATTCTCGTGAGTGTCACAGTTAATTTGCCATAAGAAGTAAGATAATTTAGGAATTAATGACTATAAATTAAAGCAGATCACAAGAGTGTCCTgaatttttaagttttaaacattGCAGGTTCTTCTATTCAGATTATCAAGTTCTTTAAGCAAATTATAATGACTCCAGTGACCAGATTAATATATAGCCTTGAATAATATCTGTgtaaataaaattttcagcCTGCCATTACTGCATGTTTACAACTCTCAGTTTGTAAaagattttttaaattttcaaaaaggatttcTTGAAGATTTTTAACAATCTTGTAGGACGGTTTTAGTTTCAAAGGAAATCGAGGAAAGCTATTATTTTTAGAAGCTGTGTAATTATACCTAAGAACAGCTAAATATCTAGAATTTTCGAAAGAATCGATCAAGGGAGTCGGGAGATATTTAAGAGTAAGTATTCGTTGGTAAACTTCGGCACAAACATTCTAAAATCTTACTAagatgaaaaaaattacaatttagaATGGTAAAATACTAAATCACATAACACTGAGGCAAACGAAAGGTATTTACCTTTTCTCGCTATTTGCAGTGAAGCTGTTATtaattgactcctgtgccgcccGTGACTGGCCGTCACAAGCGTTGGCCTTTGTttcacttctgacgtcatcacttttgaccaaaattggcatcatcttG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P48630	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max OX=3847 GN=FAD2-1 PE=2 SV=1
Q84VT2	Delta(12)-acyl-lipid-desaturase OS=Punica granatum OX=22663 GN=FAD12 PE=2 SV=2
Q8GZC3	Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005746 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00487 all species →	FA_desaturase	Fatty acid desaturase	Domain	Interproscan
PF11960 all species →	DUF3474	Domain of unknown function (DUF3474)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012171 all species →	Family	Fatty acid desaturase	Interproscan
IPR005804 all species →	Domain	Fatty acid desaturase domain	Interproscan
IPR021863 all species →	Domain	Fatty acid desaturase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32100 all species →	OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006636 all species →	Biological Process	unsaturated fatty acid biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016717 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10256	FAD2; omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase)	EC:1.14.19.6 EC:1.14.19.22	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.