Gene detail

Detailed information of ENSSYXP00000022637.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020615757.1, aryl hydrocarbon receptor protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSYXT00000023891

TTTCTTGCACTGAAAATTAACACCGCCCAGTGTACAGTTTATGTCAAGAGAATGGAAtgataaaatgttcaaaattctTGGCTTCATTTCTGCCAAAATTAATgcAAGTGTTATTCATCAAGATTTCCTGAGGTTCATACATGTGGACGATCATGACTTGATCAAGAAGAATCTTCTGCCATTTCCTGAGGACGAGGAGGAACAAGAGATGACCAGAGCAATAACAACACTGTGGAGACAGAGCGGTCTTTTGTATGCAGAATGAAATGTATTCTGAATACAAGTGCTGGCTTCTTCAAGCCATTCAGGTGTAGTGGACGTTTGCGTGAGATGACACTCCCTGACAGTGAAAGAAGAGATTATGGACTCTTCATGATTTGTACTCCACTGGAAACAGTTTCGTCATCAATGCTTGAGATCAGATTAAAAACATCCTTGTTCTGCACCAAGAACCGAATGGATCTGAGTTTCATGGATATCGATCAAAAGGGCAGATCATTGCTGGGTTATCATAAGAGAGATATAGCTCTTCAATCCAGTTATTGTATGATTCATTTTGATGATATTCCTGTGCTTCAGACGCTTCATAGTGACTTGATGGGCACTGGAAAATGCCAGGGAACGTTTCGCATGCTGAACAAAAACCTGAAATGGCAGTGGCTGACAGGGACGGCACAGGTTGTCTTCAAGGGAAACGAACCTGATTTTATTATCACAACAAACAGGCCTCTGAGtgagGAGGAAGGTGAAGAAATTTTGAGACAACGAGGACAGTTTCCTGTATTACCTTTCACGGCAAGTGATAGTGGATCACCCAGTCCCCGGAGTCCGCGCAGCCCGGGCAGCGTCAGCAGCTACAGCAATGGCGGCAGTCCACATCCAGTTGGAGTACCATGGGGAGATTTCTCTGCCACTGGGAACTTTAAATTCCCAAACATGCCAAACAAGTACTCTAGCAATGGCAGGGTAAAGAAAAAGCCCCCTGCTTCTGAAGGAATCGCAAAATCTCCTGGAAGTGATTTGACATTAGATGATCTTCATCTTGAACCATTGGAGAATGTTAATGGCAGTGATCTGTTGGTTATGGATCCACCAACCTATGAAGAAGCTTTGTTACTTGCGACAGATTGTCTTTCACTTAGTGGTGAGAGCAACAGTCTGACAAGTCCTGACGGAAGTCAACCCTCGCTATCTCAAAGCCCTCCTAAGAATCTTGAACACTTTTCACCAACACCCCAAATGGGTCCATCACCTTATCCATCTCCAGGACACCCTGCATCGCATATGTCACCCAGTGGTTTACCAACTCCTGACCCATCACCTGTGGGGCATTGTAATCCGTCAACAGCACGAGTCAACATCTCCTGGCAAGGAATGGGTCAGATGAAAGTGTCCACTCAACCTCTGCAACATTGCCAGCCTCAGCCATCTCCACAAGTGCATTCAAAGTCGGCGCTTATTTCTACCactataaaaaagaaagagaggCTTGAGATGTATGGTCCAAGTTGCGTCACAGGTCAACCTTCTAACCCTATGACGAGTCCCAGAGGAATGCAAAATGTCCATGGGAACTGGATGCCGCAAAATCAACCGCAAGTTCCCAGAAACATGCAGCAACAAGCCTATGACTGGAAAACAGCACAAGCAATGCAACACAGTCAGATGCAGAATCTTTGTGGGGACAGAACTGCCACAGCCATGGCCCAGGAAAACCCTGTATATGCGACAAATATGCAAGGAGGAAAGTGGGACAATGTTACTGTCCCACCTCTCTTTGAGGACACTCTGCCAACTCTGGAGTGTGATGGTGGTGTTGGATATATGAAAACAGGGCAAAACATTGGAGCAGGTCATCTGCAGCACCACAACTGGGAACCACCTATGGACATTTTATCGCCGCCTTACCAAGAGGACTTTCATCCAGGATTTGGATTTCAAGGGAATCCTCTCCCTGCTACAACAACGCAAGGTCAAACAACTCTTGGATGGGGATGAGAGAGAGTTGCAAGGTAGCG

Protein

Uniprot

Uniprot term	Description
Q95LD9	Aryl hydrocarbon receptor OS=Delphinapterus leucas OX=9749 GN=AHR PE=2 SV=1
P35869	Aryl hydrocarbon receptor OS=Homo sapiens OX=9606 GN=AHR PE=1 SV=2
O02747	Aryl hydrocarbon receptor OS=Oryctolagus cuniculus OX=9986 GN=AHR PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08447	PAS_3	PAS fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050933	Family	Circadian Clock Transcription Factors	Interproscan
IPR013655	Domain	PAS fold-3	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23042	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0034751	Cellular Component	aryl hydrocarbon receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan