Gene detail

Detailed information of ENSSYXP00000023387.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020616805.1, flocculation protein FLO11-like [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C4A0D9	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma floridae OX=7739 GN=BAP1 PE=3 SV=1
Q52L14	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis OX=8355 GN=bap1 PE=2 SV=2
Q66JB6	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis OX=8364 GN=bap1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004546 (this species only)
Ubiquitin family	DUB\|UCH\|UCH · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18031 all species →	UCH_C	Ubiquitin carboxyl-terminal hydrolases	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001578 all species →	Domain	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR041507 all species →	Domain	Peptidase C12, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10589 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12185	VPS37; ESCRT-I complex subunit VPS37	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.