Gene detail

Detailed information of ENSSYXP00000025490.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_027037140.1, G-patch domain and KOW motifs-containing protein-like [Pocillopora damicornis]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000026865

AAAACTTACAAAATAGGTTTggaaaaatggcggacgaacgtaAGAAAACTGGagtatcattttctttttcaaaaaagGCCTCTAGCAAGTACAGTTCTAAAAAAAGTGCTCTTAACAATGACGATGTTAAGGTGAAAGAGGAAAAACGGGATTATATTCAGTCCGCTGAAGGAAAAGAGCTCAAGAGCGTCAAACCAGAAGAAAAACCAAGAGAGAAGGTGATTCCTTGTCAAATCAAAAACCGATGGATTCTGCCTCGAGATGCTAAACTTGTCAATAGTTTAGATAGACAAGCTGCTGAGGAACTTATGAAAGATGTTTCTGGAGATGATAAGGAAGAAAACGATAAGGATAACATTGCCATTCCACTTTTGATGAGAAATGCTTTGCCCGATGTTCAGGGATATGAAAAGAATGAGAAGACAGACATTGCTTTGAGGCCTGAACAAAGCACAATGGATGACTATGAGGAGATGCCTGTGTCATCATTTGGAGCAGCCATGTTGCGTGGAATGGGATGGAAGAAAGGAGAAGCCATTGGAGGTACCAACAAAGGCCTTGCAGAACCCATAGAGTATATTCCAAGATCCAAAGGATTAGGGTTAGGAGCAGAAAGCAGACCTCCATCTGATGAAATGAATAAAGGAAAGAAACTCAAACCAGGAGACCCATCTTCAAAAACTATGTCTGGTCCTATTAAAGAAAAAGATGGTCGTGTGAGACATTTCAAAGGAGTCGGTGAGACAGTTCCACAGGATACATCATTAGATTACAGGCCTGGAGTAGGAGTGGTAATAGAGAAAGGTTCCCATCGGCATATGTGTGGAAAGATCGTTGCTGTAGATGTTGATACATCAAGAATCACTGTCCAACTCCATCTAAGTGAAGAGAACATCACTttacaccaagttaacgcaagaCTCCTCGATAATGTTGAATATAAAATTTTATCGAGACAAGACAAAGTAAAGGAAAATAGTCAAAAGTTAGAAAAAGCTTCTAAGAGATCACAAGATGATGATCGTGTAAGGGAAACGAAGCACAACGTTAGTAAATATTCTAAACTGGACAAAAGTGATGACAAAAGTAAATTCAGTTCACACAAGGAAAGTAAAACGCCCGCAAAATGCTGGCTGTATCCACAAACAAAAGTTAGGATCATCAGCAAGGATTTCAAGAAAGGCAAATATTATAACAAGAAGGTGCAAGTTGTTGATGTGGCTAGTAGAGACAGATGTATCTGTCAAACAGAGGAAGGAAGACTTCTCGAAGGTGTACCACAATCAGCATTGGAAACAGTTGTACCCAAGACTCTTGATAGTCATGTGCGAGTGGTCAGCGGTCAGCATAGAGGACAGCTTGCTGTGTTATTAAAGCGGGATACTTCCAAGTGCAGTGCTGTTATTCAACTTTTGGTGGACAAGAACGTAATAACTGCGGATTATGATGACATTTGTGAACATACCGGTGGTGTGAATGATTTCTGAACCAAACAGTAGTGGCTAAACAGCCGTCAGCCTGGCTTGCTCCGTAATGTAGCTGCTATCCAAGCCTAATACGCCCAGATGAGAGAAAGCCTCCTTCGTGGGCGTTGTTTAGAGACTTGTCGGGTTGTTGCTGACAACGTACAACTATCACTAAGGGAGCCATTTGATATTACACTGCAGGCAAAAAACATGAAGCTGATGGACAGCATGAGAAGTTACGGTGGCGATTGGTCTCGTACTTGATTGACTAACAAACGCAGCGCGTTGTGTCAGGTTTGTTTTAGCCTATTACAATTCGCCTTCTACTAAGACTACAGAACTGAGTGAGAACTGCACTCTTGTGTTTCATCTACCAACAACTATCTTCGACGAAAATTGCGTGAAAAGGACCATTACGAAACAAGAACGAAGTGTGAGGTGGAATATTGCCTGACGAGAGACTTCCTAAGGTCAGCTCTGCACATCGTCTGGTGCTGGTTTTGTGAGAATTCGATTAAAAGTCGGGAAATGTTTTCTGAGATTATCTATGTGGTCCTGTATTCTCTTTAGCTGCTTGCTCAAAAAACGGAGACTGACGATCAACTTCGATCAAAGGAGGGCCCTGTCTGTTGAAGGGATATCAAAGCGGTTAAGAGGGGGTCCTTCTTAACTACAGATTTAGAGCAGTTTAGAGCTAAGGGATTGCTGAAGGTGATATTTAGAGGTACACTATTATGTAACGTTTTGCAGTGCTTTAGGGTGGATTTTATAGGAGGGAACGTTTGCTTTGAAAAAATATGATTTCGCTTGCGTAACTAGTGCCTAAAAAGTCCCTAAAAAGGAAGAGTTCCGATTTTTGTTATGAATCAGAAATAGCTTAGCCTTCTTTATCATCATATGTATGGAATTACTATTGACACCTAAAAGAGAAAAGCTGCTGTAGAAAGTCTGTTAATACGGGTATTTATTACCTCGCCACCTTTTATGATAATGCAAGTTTTGTGAAAACAGTACATAGCG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92917	G-patch domain and KOW motifs-containing protein OS=Homo sapiens OX=9606 GN=GPKOW PE=1 SV=2
Q5B4R9	Pre-mRNA-splicing factor spp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=spp2 PE=3 SV=1
Q52E73	Pre-mRNA-splicing factor SPP2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=SPP2 PE=3 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006241 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12656 all species →	G-patch_2	G-patch domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467 all species →	Domain	G-patch domain	Interproscan
IPR045166 all species →	Family	Pre-mRNA-splicing factor Spp2-like	Interproscan
IPR041994 all species →	Domain	G-patch domain and KOW motifs-containing protein, KOW 2	Interproscan
IPR026822 all species →	Domain	Spp2/MOS2, G-patch domain	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15818 all species →	G PATCH AND KOW-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681 all species →	Cellular Component	spliceosomal complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13101	GPKOW; G patch domain and KOW motifs-containing protein	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.