Gene detail

Detailed information of ENSSYXP00000026516.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: PFX32089.1, 60S ribosomal protein L4-B [Stylophora pistillata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P02385	Large ribosomal subunit protein uL4B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=1 SV=2
P08429	Large ribosomal subunit protein uL4A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2
Q9D8E6	Large ribosomal subunit protein uL4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006123 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14374 all species →	Ribos_L4_asso_C	60S ribosomal protein L4 C-terminal domain	Domain	Interproscan
PF08592 all species →	Anthrone_oxy	Anthrone oxygenase	Family	Interproscan
PF00573 all species →	Ribosomal_L4	Ribosomal protein L4/L1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025755 all species →	Domain	Large ribosomal subunit protein uL4, C-terminal domain	Interproscan
IPR023574 all species →	Homologous_superfamily	Large ribosomal subunit protein uL4 domain superfamily	Interproscan
IPR013901 all species →	Family	Anthrone oxygenase	Interproscan
IPR045240 all species →	Family	Large ribosomal subunit protein uL4, eukaryotic and archaeal type	Interproscan
IPR002136 all species →	Family	Large ribosomal subunit protein uL4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19431 all species →	60S RIBOSOMAL PROTEIN L4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000026516.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.