Gene detail

Detailed information of ENSSYXP00000027592.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: PFX16983.1, Mothers against decapentaplegic-like 4 [Stylophora pistillata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000029023

ATGTGCGACTTGTCGTTATTGTCTGAAATCCATAACAGGATAGACTCACCGAACACTGACCGCGAACAGATAGACACGTCCCTGTTTGCTACGCCGAGCTCCGTCGCGGAGAGGCTGTCGAAGATGGCCGTGGCGCCGAACAGCTCTGATGCTTGTTTGAGTATCGTTCACAGCCTGATGTGCCACAGGCAAGGCGGTGAATCGGAGTCGTTCGCGAAGAGGGCTATAGAATCTCTCGTGAAGAAACTTAAAGAGAAAAGGGACGAACTGGACTCGCTGATCACTGCTATAACATCTGGCGGAACGCATCCGTCGAAGTGCGTTACAATTCAACGGACACTAGACGGAAGGTTGCAAGTCGCTGGACGGAAAGGTTTCCCCCATGTCATTTACGCGCGAATCTGGAGGTGGCCCGATCTGCACAAGAACGAGCTTAAGCACGTCAAGTACTGCCAGTTTGCTTTTGATTTAAAGTGTGACAGCGTTTGCGTGAATCCTTATCATTACGAACGAGTCGTCTCGCCGGACATCACCGGATTGGCTTTGTCGAGGAATCCAGaTGGAGCTTATGCTGGTAATTCACAGCCAGATCCAGATTTCCGTCAAGCTGTTGGCCCCACTGCTCATCACTATCCTGGTAGTCAAACAATTCCTTCAGTGGTTGGCTCCCCTCACGATATGTACCCTGGTATGCACGCTCCTGCTGATCACGCTATGGGACGTGTCTCTTCAGCTGGACCACCCGGCTGGGTTCCACCAGGATCAGCCACATACACACCTGGGCCCCACCCAGGGACTGGCTATTGGAGTCAAGATCAAACAACAGAAGTCCAAGACGGTGCTCCTATTTCCAAACATCCTCCTCCCGAGAATTGGTGTTCGATATCCTACTTCGAATTGGACCAGCAGGTTGGCGAGATTTTCAAGGTCATGTCTTCTTGTCCGTCTGTTACAGTGGATGGTTATGTTGACCCGTCAGGAGGCAGTAGATTTTGTCTTGGCCAACTGTCGAACGTCCACAGAACCAAGGCTAGCGAGAAGGCCAGGTTACATATAGGGAAAGGAGTTCAGTTAGATTTAAGAGGCGAAGGAGATGTGTGGGTGCGATGTCTTAGCGAGCACAGCGTCTTTGTGCAAAGCTACTACTTAGATAGAGAGGCTGGACGTTGCCCTGGAGATGCTGTCCACAAAATCTACCCTTCTGCGTACATCAAGGTGTTTGATTTGCGCCAGTGCTATCGACAGATCAAACAACAAGCTCATGCTGCCCAGGCCGCCGCTGCAGCTCAAGCCGCAGCCATTTCCACCGGAGTGGGTCCTGGCGCTCTGTTACCGCAGATGGGTATGAGCGTGGGCGTCGATGACCTTCGTAGGCTCTGTATTCTTCGGCTGAGCTTCGTCAAAGATAAGAGTGCAAAATCTAAAAAGAGGGATGGTGGTACCCCTGATAAGATGAGCTCACCAGTTGGTTCTGCTGTGCATATCCCGGATGAATTGTGCATAGGACCGTCAGTTGGTAAAGTTATCACTGGTGATGATATTGATTCTCTTGCAATCAATGTGGATGAGCTCAAAAAGGTACATCCTCCCAAGAGACCAGCTGTCCCTAAACCATTAACAACTGTTATGGTACGCAAGACACGGCTCAAACAATCTGCAGAACAGAGCCAGCCACTGGGAAAGAGTGTGACAGTTGCTAGACCAGCTCCTCCTGATGTTCCTTTAGTTTCTACTCCAGTTGTCAGTTCAACTGGTCCACTGTTTGATGAAGATGGGCAAGTGTTGACTCATACAATCCTTGGTTCATGGGAAGACTTTCAGCAAGAAGCTATAGCAAGGGGAGACATTGAGAATCTACCTCCATTTTCTGCTTACAAGATAAATGAAAGTAATGCACTGACCAACTGGCAGAGACAGATGGTACAAAGAAGGAAGCAGCAGCAACACCTTTCCAACACTTTGAACACCTCAACAGACATGTTAGTAATGAACCAAAGTGAAGACTACAGGGAAACGCAAGAAGACAGGTATGCCATTGACAGGTCAATCCCATCACTGGACTATGGCAAAGGATATCGTGTTGGCAGTGAGTTCTGGAAACAAGTGGAACAGATTGGAGATGATGAAACAGGGATAAAtatGACCCTAACACAGACCGAGCGAGGTTATCCACCAGCAATTGAACACATTGGAAAAGCCATCTATATCAAGAATGAAATGGgCATAGAATGGTCCAATAAGCACAGGCCTGCTTCAGTGCACTATCCATGGCAGAAGTCAACCTACCTTCAGGAGAGAACGAAACAGCTCCAAACTGTTCTACATGAGTTAGATCCTCATCAGCCGTACATTGATGAGCTCGAGGTGATAGGAACAAACCAGCCCCAACATTCATCCAAGTTTGACATGATGTCAGTAgtagaggaagaggaggaggaggaggagaatgAAATGTTAGAAGAAACCCTCAGTGAAAGGGATCCTCTGGCAAACATTGCTGATGTTGTACCTCAGCCCATATTTGGACCCTCGTTATCCATTGGTGGTCAAACGGCACAGTGGAACGGACAGAAGATTGGGGTCAGTGGACAAGTGGGTGTGGCTTGTCGCGTGATCTTTGACGCCAATGTGGGAGATAGGGTCACCTCTCATTTGGACATATGCAACGATGGAACAACGGCTATATACTTCTCTTGGAAGAAACTACCTCGGCCGAATGTGCTAGGTACAAAGCTCGCAGGCCAGACTCAAAGGTTTTACTTTGACACTAAGAGCGGAGTGATTCTGCCAGGAGATACTTTGAAGTTCCCATTCTTATTTAAATCGCCCAATGCTGGGATCTTCACAGAGACTTGGGAGCTTATGACCAGGCCTACATTATGTGGTGGTTCCCCTATAAGAATCACTCTGAGAGGCGTAGCAGTGGAAGATGACATCTACAAGGAGGCCAGACAACAAATTGAACAGGAACTAGCTCACCGGGAGGCTGTGGAAACTGCCACCAGACTTCTTGATGAGATCCTTGAAGGCGTTCGAACTCCCGAAAGGCCCAGATCCCCTGTGGATGCTTATATCACGATGTATTTCCAGGATGAGGTTGTTCAAGAATTGAAGCAGATTTACGCACAGCTCGAAGAGGAGGAGGATTGGGACTTGTCGCTACAGTCCCTTCAACAGaAAATCATGTCAGTTGAAGATGCTGACCGGCGTGACGGCTTGCTCCAGACACTGAACAGTTCAATATCAACCTTATCGTTTCCACCGATGACACCCGTAAAACACGCCATGTATGCTGCAGGGTATCAACTGCTCTGTGAAATGGTGGACAGCATTGTGGGTCAGGCCAACATGATAAGATCTATACTTGGTCTTCCTGAGAGAGAACTCGTCGAGGATTCATCACAAGAAGAAGGTATGTCCACGGTGTGA

Transcript

ENSSYXT00000029023

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O70437	Mothers against decapentaplegic homolog 4 OS=Rattus norvegicus OX=10116 GN=Smad4 PE=1 SV=1
Q13485	Mothers against decapentaplegic homolog 4 OS=Homo sapiens OX=9606 GN=SMAD4 PE=1 SV=1
P97471	Mothers against decapentaplegic homolog 4 OS=Mus musculus OX=10090 GN=Smad4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003529 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03165 all species →	MH1	MH1 domain	Domain	Interproscan
PF03166 all species →	MH2	MH2 domain	Family	Interproscan
PF14646 all species →	MYCBPAP	MYCBP-associated protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017855 all species →	Homologous_superfamily	SMAD-like domain superfamily	Interproscan
IPR052822 all species →	Family	MYCBP-associated	Interproscan
IPR036578 all species →	Homologous_superfamily	SMAD MH1 domain superfamily	Interproscan
IPR003619 all species →	Domain	MAD homology 1, Dwarfin-type	Interproscan
IPR001132 all species →	Domain	SMAD domain, Dwarfin-type	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013019 all species →	Domain	MAD homology, MH1	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR032707 all species →	Family	MYCBP-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48333 all species →	MYCBP-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000027592.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.