Genomic Location: not available for this species
NR annotation: CAH3158117.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation MLORD · all data for this species · gene families
| CDS |
| ENSSYXT00000029366 |
| Transcript |
| ENSSYXT00000029366 |
| Protein |
| ENSSYXP00000027908.1 |
| UniProt accession | Description |
|---|---|
| Q9W676 | LIM domain-binding protein 2 OS=Gallus gallus OX=9031 GN=LDB2 PE=2 SV=1 |
| O55203 | LIM domain-binding protein 2 OS=Mus musculus OX=10090 GN=Ldb2 PE=1 SV=2 |
| O43679 | LIM domain-binding protein 2 OS=Homo sapiens OX=9606 GN=LDB2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001819 (this species only) |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21031 all species → | WDR54 | WDR54 | Repeat | Interproscan |
| PF17916 all species → | LID | LIM interaction domain (LID) | Domain | Interproscan |
| PF01803 all species → | LIM_bind | LIM-domain binding protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029005 all species → | Family | LIM-domain binding protein/SEUSS | Interproscan |
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR049546 all species → | Repeat | WD repeat-containing protein 54-like beta-propeller | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR041363 all species → | Domain | LIM interaction domain | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10378 all species → | LIM DOMAIN-BINDING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000122 all species → | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005667 all species → | Cellular Component | transcription regulator complex | Interproscan |
| GO:0007399 all species → | Biological Process | nervous system development | Interproscan |
| GO:0030274 all species → | Molecular Function | LIM domain binding | Interproscan |
| GO:0045944 all species → | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
ENSSYXP00000027908.1.
