Gene detail

Detailed information of ENSSYXP00000028374.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020608906.1, synaptotagmin-15-like isoform X1 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000029869

ATTTAAATTGCAAATACTTTGTGAATATAATTAGAAGTCTAACaactggtccgctgaaagcttTCCCGTCGACCCAACAATAAATAACAGCGGACGAAGCGTGTCAAAACGTGAATGATTCTCCGGCGCCGTGATCGAGAATATTTTTTCCTTCCACTTCGCTTCTCACCACAATGGTGAGGAGATTCGAATGGAGTCAAAATCAATTTGCCGATAATTCGACCGTCCTTGATACGGCCCTGGAAAACCGTTCTTCGAGCGATACAAAATTTCCAGTCTTGCCCGTGGTACTAACAGTCGCTCTTGGCTTGCTCAGTGTAATTCTCCTTGTCACGCTGTACCTCGTCAGAAGACAGCGCAGACAGGCcgaaaaatataaacaatacTCTCAGATAGCAAAAACCGCTGTTCAACCACCGGAATTTACCGTCAAAACGGCTCAACAGCCCCACGCGCCGACGAAAAAGTTACCGCTACGTCGACTGTCAGAGAAAATACTGTCGTCCGAAGAGTCGTTATCGCCGATGTCAAGTGAAGAGATGTTCCACGACGCACAAGAACGACTGGAAGGGCGAGCATCGAGATCGGTTTCAAGTCGTGAACCGAGCCCGGCAAGCGCGCTGGAGGAGGATGAGGAGGATGAAGAAGAGCCCTATCCCTTAGACCATCTCGGACGCATTTGGTTTAATTTGGAATACGATAGCTCAGCAGAAAGTCTAGCGGTGACTTTAGTCAAGGCACGAAACCTTTCGCCTCGCAGCAAAACTGCGATAACGTGCGATCCGTTCGTAAAACTACACATTCTGTGCCCAGAAGAGAAAAACGTCTCACAGAGCAAATGTAAAAGGAAAACGCGCCGACCAAACTTTGATGAAATGTTCTATTTTAATCTGCCTGTTTCGGAGCTCGAGAAGTGTACACTTCGTTTGTCCGTATATGACGGGTATAGAGCGAGCCAGCAAACTGTGGTAGGAGAAGTGCTCTTTCCTTTGAATGAGTTGGACACAGATCAGAAAGTGGAATTGTGGAAAGATCTCGTGGCTATTGAAGAGagCCCGTCCGAACTTGGTGAAATTCACATTTCCATGTCCTACTACCCCACCCTGGACAGACTTACAATTATCGTTCTCAGAGCTGCCAACCTGAAGAAAATGGAACCCCACGGGACAGattCATACGCCAAAGTGACGTTTTCAATTGGTAATAAAATAATCAAGACGAAGAAGAGTACAGTCCATCATGCAACGCGGGATCCACTGTACAACGAATCTTTTAACTTCTCAGTGTCCGGGGATGACCTGGGCTCTGGTACTCTACTTGTTTCAATTATGCACTCCAGGGAGGGGGGGAAGGAAGACCAGTTAATCGGAAGGGTCCTGCTGGGAGGAATGATGTATGCCAGGGGCACTGAGTGCGAACACTGGACTGAAATGATGACGAATCCGCGAAATATGATCAAATACTGGCATACGTTAACAGGTTAATTAGGGAAATATGGCAATTATATTTTAAGTACAATCTGACTTCATGGTTATCCGTTTTGCTCATATATAGCAATGTCTCTATTATAAAAGCACCGTTTAAGAAAACTAAGAGAAATAACTTTTCCAGATTTGTAATATGTGTatttttatttaccccataaatgtaattttataatttttttttgaactCAAAAAAGTACTGACCAAAAAAATGTAACTTAATAAACTTATTTACCGACAAGACGTAAAAAAGCGGAatccaaataaaataaagttgaatACATTTAAGTAACAAGCATTTTAAATTGTATAACAATTATAAGTGCTGAACACTTCCCAGACTAGTGCACTGGTCACAGTGTTGATAAAAGGCGTCCAATATCTGATAAGAAATCTACAATCAATCAATACAAAACTTCCGTAAAAAAATGCAGAAGGAAGGAAACAAGCTTTCAGTAGATataatacactctttttttttaaataagaaccagtaaaatttagctcaggctcgatgttcttattttttcggccatttcagcctcaaaatgttcttattttgttcttaaaattctGTGTTCTCTAATGGCCCCAAATGTGGTTATACAGTACTTTACAGTACTGACCCTGACCTACAGGGTGCCTAAACCATAGATAAACATTAAACAGTTGGATTTAGTAATTGTAAAAAATGGGCGAAGCTTACAGAACGTGGATCATATTATACTGTACCAAAGCACTGTTTGCATGCGTGGCGCTACATGTTTTCTCATCCATCAAGACGTCAACGCGAAAGCACTGGACTGTACTGGAATTACCTTTCACATGCATCATATAGTGACGGACAAAGAACCTGTGCTTATCAGTATATGTATACAGTACATGAAGTGTTCATTGTTCATACTCATAGATGTAATCTGTTACTGTTTACACACGAAAAGTGTGATAATGAAGTTTAAGAGtgatatatatataattattatctgaaagactgtatag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BQS2	Synaptotagmin-15 OS=Homo sapiens OX=9606 GN=SYT15 PE=1 SV=3
X6R8R1	Synaptotagmin-15B OS=Homo sapiens OX=9606 GN=SYT15B PE=3 SV=1
P59926	Synaptotagmin-15 OS=Rattus norvegicus OX=10116 GN=Syt15 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000239 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR047897 all species →	Domain	Synaptotagmins 15/17, C2A domain	Interproscan
IPR001565 all species →	Domain	Synaptotagmin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10024 all species →	SYNAPTOTAGMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000149 all species →	Molecular Function	SNARE binding	Interproscan
GO:0001786 all species →	Molecular Function	phosphatidylserine binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005544 all species →	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0014059 all species →	Biological Process	regulation of dopamine secretion	Interproscan
GO:0017156 all species →	Biological Process	calcium-ion regulated exocytosis	Interproscan
GO:0017158 all species →	Biological Process	regulation of calcium ion-dependent exocytosis	Interproscan
GO:0030276 all species →	Molecular Function	clathrin binding	Interproscan
GO:0070382 all species →	Cellular Component	exocytic vesicle	Interproscan
GO:0071277 all species →	Biological Process	cellular response to calcium ion	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19914	SYT15; synaptotagmin-15	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.