Gene detail

Detailed information of ENSSYXP00000030242.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: PFX16989.1, putative methyltransferase TARBP1 [Stylophora pistillata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000031821

ATGGCGGAACTACTCCAGTTCATCTGTGAGAATTCTGATCACTCCCAGATCTTGGCAGTTCTTAAACGATTTGTAGAGCGGAAAGATCTTTCTGTCGATACAAATTTCTTAGAATCGCTCAAATTAGTGTTATCGGAGCTTGAAAAATCAAAAAACTTGACCGAAGATTTAGCCAGCAAAGTTTTAAAGGATATGTGTTGGCCTATTTTGTATGGCTCTTCGCTGGATAAGGACAGTCAGCTGTCTGGAAACAATCGAAAGAAGCTTCATCTCTGCTACGATATTGTGGCCTTCTGTTGTTCGGTGTTTCCGACTACTTTGCTTTCAGGAATTTGTGAGAAATCCTTGGAGGTTCTAAGAAGATACGTTGTGGAGACGAGTGCTACTGAAGATAACGCACATGATGCCTCGGTAACTTTGGATCTCATCGGAAATCTTGTCAAGTCAGATGCCCTAAATGCTTCTCAAAGTGCCAATGTTATATCTGGAGAAATTGGAGATAAACTATTCCTCGAGCTTTTAAATATTCTACCCTACACAACAGAGAGCTTGTGCGGCAAACTCACTGGTGTTGTGTTGCCAAAGTTTTTGGAATACAAGAGAACAGAACGATGTGAGGCTGTTTGGAATGTGGTGAAACAGATTTCTCGGAATCACGCTGCTGGTTCAGCTACTGAAACCTACAATCAGACCTACACCATTCTCTGTGGACTTGCAGATTTCTTCTCTAGCCCAGATAACCACAGTCTGTTTCTCCAAGCTGACTTCTGGGAGATTATTCAGCAGGGTCTTGTGTTGAATGAACCTCTTACAAGAAAAAGGAGTGTGTACCTGTTGAAAAGGGCATTAGATTTGCTGGACAAACAACCATGTAATTTACTGGTGCTGAGCGAGAAAGGAAGTCACATATTTTACTGGTCATGTGACAAAAAGGACTCTCTTATGACTATATGGCATGATTATGTTCTTTTAATGGAAACATTGGATGAAAAACAGGCACACCTTATCAAACCAGTCCTACCGCGAATTTCAAGTATAGTCAGTGCCACAAAGAAAACTATGAATGGTGAAACAATGCTGGACATTTCATGGCTTTTCACACTTTACCACAGGGCATCTCAACATGATACCAGGTTCATCAATAGATGGGCCATCCTGGACCTACTCAACATGGACCTGTGCAACTCACCACTTCTAAACACCTGTTACTGGTGGTTCCTTTATGGCCCCGTGATGAGCATGCTCGGCGAGTATAATATCTATGGCAGAGCGGATGCTGGTCTCAGAGGAGACCCTCCCCCCGTAGGCGCTGCCGTTGTTAGATTTTTCACAGAGTTTTCCAAGAACCTTCCCACAGACAATGACAGGCGATCGTTTTGTACAGGGCTGTTAGCCTCCATTGTCAAGCAAGATTTTTCGCAAGTTCCTTTGGTGTTTATGTCGCAGATGCTTGCGAGTCTTCCACCTTGCAAAGCTTGGGATTCTAAAGCAATAGGAAGCATTAGCGAAATCTTTCCTCTCTTTAGAACGTTTAATCCACACTTGTCAGGTGCTATTCAGAGTTTTCTTCTAAAGGCGGTTATCAATTTGACAGACCCCAGTCGCGTAGCGTGGAGTGACATTGGAGATTTCCTCTCTCTTCTCTCTGAGGATGATTGCTTATGTCGAGGAAATGTTTTATGGGAAGCAACTGTTCAATGGGTGGGACAAATTCATGGCACCGTCGTCGGCCAAGAAGATTCTGGTAAAGCCGGTTTGAGCCTAACTGAAACAGGTTTCTCAGACCTGTTTGAGCACCTGAGAGCAAGCGTGGAGGCATTTCTTAACGATGATACACTAGAGTTATCAACCGGTGACCCAGAAGTGGAGTCTGTTGTAAGGTTAGTCATCATTGCATGCGATGCTTCTCTCGAATGGTCAAAGAACTCAGAGAGTAGGCAGCTCAAGGAGGACTTATTTCGACAAATTGTGGAGGTTATCCAACGCGCAAGTGGACATGTCTACGCTTCGGAGGGTAGAACAGAGAGAGCCGCCAGGATTCTTTCAGGCATCTTACACCACATGAATAGCACGACGGCCTTTCATGAAAATTCGAGTACAAAATCAGACGGCAGCGCCACAGCAACGCAGAGCATTGATAACAGCATGGGAATCATGGAGGAGCTGTTGAGGTCCAGTGGCGCAGACATTCTTGAGCTACTTTTGAGGAAGCTCAGCACTCTGTCCTCGACCATCTCTCCAGTGGACAGAAGCTCTGCTTTCCTTGATCTCGCTGGTGAGCTGTTCACGTTTATGGCCGTTACAGTGAGCTCCGTTCAAGGTCTCGAGGTGTATTTCCGGTTTATTGAAAATCTCGTGCAAAGAAGCCGTAAAATAGTCCTGGACAagcagtcagacagacagaagCTGGCTGTGAGCGACTGGCGTTCTTTTGTGTTGGCCATGAAGTGTCTCGCCTGGTGTTCCACAGCTTTAAGAGCCAAACCAAGCCTTCACAGCACACATCTTGTGCAGGCTCTGTCACAAACGGTGGCCGAATTTGATCTGAGTTCCGAGTTTCCAAAACCCAGGCTTCTGTATCAAGGTGAAGAACGTGAAGATACTTCAACAGAGACAAGCCTGTTTGTAAAGAAAGGTTGGGGAAGACTGGTTTCTGACTTCATCGAAGCTCAATGGCGGTGCGTCGAATTTCTACTCGAGCAGGAGTACTCTGATAGCGGGAGCAGACAGCTGAGGGACAAATTTAAGCCCTTCATATCGAACCTCCCTGACGCAGCGCTCGAAGCACTCTCTTTGGGTTCTGGTCTTGCGGTGGTGCCTGTAATTAGATGTGTGCGCCTGTTAACCCCACGAATGCTGCTGACAGATGACATGCTGTGCTCACAGGCTCTTGAATCTGTGTGGTGGACATTCCAGGACCGGCAAAAAGGCGATCACACCTGGTTCTGGGGAACTTTGAGAGAGATGACGGAAGTGCTTTTTAATCCCTGTCTCCTGGTTCTGCCCGAGGGACACCCCATGACTGCAATAGTGCGCAAGTACTGGGGCGAGTTGTTGACTCTGGGAGAAGATCGTCCGGGAATTGTGAATCACGTGATTGGACCGTGCTGTAAATTCTGGGCGAACTGCCAAAATAATGATCCAAATCTAGCTCGTGACATCAGCGAGGAAGATCGTAAACGAAGCTTAAAAGTTCACTTAGATCTCCTGACCGAAGCTTGCGTCTTTGGCCCCAGAGTGAAGAAGACAATGCGTGTTACTTATTATGTGCTAGAGTATGTTCGTATGCTTGGCGAGGCACGCGAGATTAGCCGCTTGTGCGTGGACGAACTGCGCGATGGCACGCGTGTGCGAGTGAACGGTATCAACATGCTACTGACGTTAAATCCAGAAAACGAGCGTGACGCGACAGTTCTCCAACGTGTCGTCCGCGCTCTCATCGCCAAGCTTGACGAGCTGACAGAAGAAAAACCGCGCTCATCTATCAACTCGTATTCGCACAGAAGAAAGCATCGAGTATGGCAAGCGATTCTCGTGGCACTCTCTCAGTTGTTCAAGGCCGACGCCGAAGTGATGTTTGCGGGTGAAGTCTTGGAAGAGAGTTTTCGCGCCAGTGTTAGCGAGAATCAAGTATCGGTGAGGAACTTTCTTCAGTGGACAATGGTGCTCATTTTACAAAGcaggacactttactctcacaataCCTCTTCCCACCCTGGTGTATTAAAGAGAACAAGTCAATTTTATTGTTCAGGACAACACGGGGAtcagaccatttccgagttacctaaaGTCCAAGCCTACGCTCAGGTAGCGTTACAGAAGATGTGGCTCACCTGCCAGCGACGAAATTTGCATGACGTCATCTCCAATCACAGCATCATCCAGTCGTGCGTGTATTTCCTGGAGAGAAGCAAAGACGGCTTGCGACAGAAAACGCGCCTCTTGGGAGACTTCTTCTTCCTTGATTGTCATCCTTTCAGAGACTTTTCCATTCAAACCCTGTTTGAGACCCTCCCTCGCCTGGCGGAGGTTACTGACGAAGAGTGGATTTCTCCCAAGTTTTTCAGCCAGGGATCGTTGGGTATGCGCGTCTGGGAGTCTGGGGCTGACGCCCGTGGATTACCGCTGTACAACCCCGAGGATACACGTCTTGCTCAGATTTTAAACGGTGTTTATGTTGAGTGCGATGAAAGCATTGGAGAACAAATCAGTCGAAGATTAGCGGGCCAAGCATCCAACAGGTCAGACTCGGTGCAATCGAGCGTGGCGGTGGACGAAAGAAATCTGTCCGGACCACAGAGCCACGATGTTCAAAAGAAGATCGTGCCCTGGAAAGTGAATCCTCCTGATGAAGAAATGATGTCGGAAATGCAAGAGCAGCGAATGGCGAACCTTCAGAAGAGCTCGTCTGGAAATCTGATTGTAGTCGCATCGCTCATTGACAAGGCCCCAAACCTCGGCGGTTTGTGTCGGACGTGCGAGATTTTTGGCGTTCAGACGTTGGTGCTTAGCAATTCGCACGTGATTGAAGATGTGCAGTTCAAGTCACTTAGCGTGAGCGCCGCAAAGTGGATGAACCTTGAAGAGGTACGCATGTCCGAGCTGAAATCCTACCTAGACAGCATGCGCCACGAGGGTTACACGCTGGTCGGCGTTGAACAGACGGCCAACAGCGTGAACCTGACTCAGTACCAGTTCCCGCACAAGTCGCTTTTGTTACTTGGCAACGAGAGGGAAGGAATACCTGTGGAGCTGATTCAGATGCTGGACGTGTGCGTGGAGATCCCGCAGTTTGAAAAGCTAACCGATCCTCAAGTTTGGTTGGAAGCAGCAACACAGATCTTTTATTCCCTGGGGTTAGCTTTTGGAGGGCTTATCGCAATGTCGAGTTACAATGACGTGCAGAACAACTGCAAGAGGGACGCCATTCTAGTGTCCTCTATTAACTGTGGCACTTCCATATTTGCTTCAGTTGTTATTTTCTCCATTCTTGGATTCAAGGCACATAATTCCTACCACGAATGCTTAGACATGCATGCGGGAAACACAATCCTCTCCGTTGCAAGCTTCTTGCTTGGTTTACTCTTTTGTCAGAGGTGTGGCGAGTATTGGCTGCAGATGTTTGACTCGTTCAGTGGGACCATCCCGTTGCTGTTCATCGGCTTTTTTGAACTCGTCGCTGTCCAGTATATATATGGTGGATCCAAgtttgaAGACGATATCGAGTACATGACAGGAAGCCGTCCAGGCTGGTACTGGAAGATAACCTGGCGCTATGTTGCACCCATCCTTGTGTTTGGTATTTTGACAGCAAGTATTGTCAACATGGGAGTGAAGCCCATTGTTTACTCTTCCTGGCATCCTGAACTTGCTGACGTCGTTCCCGCCCAGTATCCCGGATGGGGATATTTCGTGATCGTAATTTTGATTATATCATCGTGTTTCTTCATTCCGTTGGTTTTTGTACTGCGGCGGTTTGGTTTTACCACATACCAGAGCAAGGCGCAACAATCTGGCCAAGATGACGTCATACCACCAGGAGCAATGACGCCACAGCTGTCACGTGTTGGATTGAATATGACCGAAGAACCGCTGGCTGGTACAGACGACTGTGACTCGCAGTTCTAG

Transcript

ENSSYXT00000031821

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q13395	tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 OS=Homo sapiens OX=9606 GN=TARBP1 PE=1 SV=1
E9Q368	tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 OS=Mus musculus OX=10090 GN=Tarbp1 PE=1 SV=1
O88576	Sodium-dependent neutral amino acid transporter B(0)AT3 OS=Mus musculus OX=10090 GN=Slc6a18 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005153 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00209 all species →	SNF	Sodium:neurotransmitter symporter family	Family	Interproscan
PF00588 all species →	SpoU_methylase	SpoU rRNA Methylase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029026 all species →	Homologous_superfamily	tRNA (guanine-N1-)-methyltransferase, N-terminal	Interproscan
IPR000175 all species →	Family	Sodium:neurotransmitter symporter	Interproscan
IPR029028 all species →	Homologous_superfamily	Alpha/beta knot methyltransferases	Interproscan
IPR037272 all species →	Homologous_superfamily	Sodium:neurotransmitter symporter superfamily	Interproscan
IPR001537 all species →	Domain	tRNA/rRNA methyltransferase, SpoU type	Interproscan
IPR044748 all species →	Domain	Trm3/ TARBP1, C-terminal	Interproscan
IPR045330 all species →	Family	Probable methyltransferase Trm3/TARBP1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12029 all species →	RNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008173 all species →	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0016423 all species →	Molecular Function	tRNA (guanine) methyltransferase activity	Interproscan
GO:0030488 all species →	Biological Process	tRNA methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000030242.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.