Gene detail

Detailed information of ENSSYXP00000032563.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: KAJ7370788.1, Cell cycle checkpoint protein rad17 [Desmophyllum pertusum]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000034290

AACTTCTCAAGATGGCGGTTGACAGTGACAGCGTTTGTTACGTTTGAGTCGTTTGAAGTTGGTTTGAAGCATACAGTAGTTTCATGTTTGCTTGCAATGAGCAAGCATCACAAACGCAGTGCCCTAGTGAATGGTGACGACCGCAAGAGCTCGCTGAAAGAACCATGTAATTCCTTAAGTGCTTCAAAATCATTTCTGCATTCAGGTagtgatgctaaagaattaaaTTTATCTTGGAAGAAGCCACAGACTGGAAAACTTAAAGGGGCAACCTTTTCATCGACAGGGTCAAAGAAACCCAATACATGGATTGCATCTTCCTTTGGTGACTTTGCTGAAGACAATGCAAAGAGAACAAAACAAGTGAACATTGAGAATTCTTTTAAAACAGATGGCTGTCAACCCATTCCACAGAAGCTTAAGAAAGATGAAGATCTCTGGCTAGACAAGTACAAACCAAAGtcagagTCTGAACTTGCCGTTCACAAGAAAAAAGTGGCTGAGGTCCGTAACTGGCTTCTGGATCACTTGTGTTCACAGTCATCACTTGGAACTGTCTTACTGCTCACTGGCTCAGCTGGTGCAGGTAAGACTGCAACAGTTCATGTGTTGGCAAATGAGCTAGGATTTGAAGTGCAGGAGTGGATCAACCCTCTTAGTGAGACTGAAGCCGAGGGTGAGTATTCAAACTGGAGAAGCAGCAGTCAATCCCAAGTTAGACAATTTCAAGACTTCATTCTGCGTGTCAGCAAATACCCCACCCTATCTTTATTCAATGAGAAAAGCAGTGTCACGGTcaagaaaattattttagtGGAGGACCTcccaaatatatttttcagagATGCTACCAAACTTCAAGAGGTTTTGAGCATCTATCAACAGAAAGGGAGAGTTCCCATTGTTTTCATTATCTCTGACAGCCATCATGGAGACTCCAATGTTCATAAACTGCTCCCTAAAGATGTTCAGCATAAACTGCATATTCATAACATCAGATTGACTTGGatgaacaaaaaacaacaaaaaaaaacaaccaaatgCGAATGTCCAAGAGGAGCATTTAAATGCAGTCACACCGGCCGCTCTTTTCATTCATGGGATCTACCATCTAAGCTGTGCAGATGTGGAATGTCAGTGGAGAAAGAGAAAATTGAACACTTCGCTTGCAAATCAAGCAGTTACTGAACTGTTTCCCCTGCCCAAAAATTACTGTGCTTTGTTGAGGACGCCGACCAACACCGATTGTTCCGCATTCTATTAAGATCTAAAGAACTATGGACTTTGCTAGCTGCTCAGCACTGAACCACCTGTTGACAGCAAGCTACCCATACCCTCTATCAAGGAAATTATTtattgtgacaaatttctttgaGCTAGAGAAATTCAAGAGCATTTGGATTATTTGGCTCGCAGTTCCAAACTAgatcaaaaaaaattattaggATAAGTGAGATAACAGTTGGCCAAAGAAACAACCCTACTTGACATATCGCAAGAAGCGGCTGACTTAACACCAGTAACTTTGGCTCCATCCTTAATGGGAAAAAAATCACCCCTTCACTACTGAAACGTCTTCTCAGGGAACACGATTTGTCGAGAGTTAAGTTTGTCAGCAAGTATCATGTCCCCAGGGGTTAAGTGTTTGAGGAGGCCTGAACTCCTGCACAGTGGCTTTGTCTGAAATAGATCCAGGGAAAAGCTtacttacatacatgtaggctATTACGGCATTTGGTGCAACATCAACAATGACTTTAAATGAATACATTCCATGATAGGATGAGTATGTTGTATGGTCCAGATGCTGCAACCTCGATAACAGTGCTGTCTATGACTATGTGAAAAAAGATCCATACTCACTGACTAAAGGATAATAGGGTGTGCTAGTTTGCTTTGGTCTCGTGATCGAGGAATAATTGATGTCACAATTTCATGCAACACATGAATAAAATGTTGTAACAATGTCAGCAATTGTAGCAACACTACAATTAAATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NXW6	Cell cycle checkpoint protein RAD17 OS=Mus musculus OX=10090 GN=Rad17 PE=1 SV=2
Q5R652	Cell cycle checkpoint protein RAD17 OS=Pongo abelii OX=9601 GN=RAD17 PE=2 SV=1
Q9XT62	Cell cycle checkpoint protein RAD17 OS=Chlorocebus aethiops OX=9534 GN=RAD17 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004588 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03215 all species →	Rad17	Rad17 P-loop domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004582 all species →	Family	Checkpoint protein Rad17/Rad24	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12172 all species →	CELL CYCLE CHECKPOINT PROTEIN RAD17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000077 all species →	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0003689 all species →	Molecular Function	DNA clamp loader activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0033314 all species →	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000032563.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.