Genomic Location: chr14:7183087...7190844
NR annotation: XP_020631614.1, sulfite oxidase-like isoform X1 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families
| CDS |
| ENSSYXT00000035530 |
| Transcript |
| ENSSYXT00000035530 |
| Protein |
| ENSSYXP00000033734.1 |
| UniProt accession | Description |
|---|---|
| P07850 | Sulfite oxidase OS=Gallus gallus OX=9031 GN=SUOX PE=1 SV=3 |
| P51687 | Sulfite oxidase, mitochondrial OS=Homo sapiens OX=9606 GN=SUOX PE=1 SV=2 |
| Q60HD0 | Sulfite oxidase, mitochondrial OS=Macaca fascicularis OX=9541 GN=SUOX PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003450 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03404 all species → | Mo-co_dimer | Mo-co oxidoreductase dimerisation domain | Domain | Interproscan |
| PF00174 all species → | Oxidored_molyb | Oxidoreductase molybdopterin binding domain | Domain | Interproscan |
| PF00173 all species → | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008335 all species → | Family | Eukaryotic molybdopterin oxidoreductase | Interproscan |
| IPR036400 all species → | Homologous_superfamily | Cytochrome b5-like heme/steroid binding domain superfamily | Interproscan |
| IPR014756 all species → | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR005066 all species → | Domain | Moybdenum cofactor oxidoreductase, dimerisation | Interproscan |
| IPR000572 all species → | Domain | Oxidoreductase, molybdopterin-binding domain | Interproscan |
| IPR036374 all species → | Homologous_superfamily | Oxidoreductase, molybdopterin-binding domain superfamily | Interproscan |
| IPR001199 all species → | Domain | Cytochrome b5-like heme/steroid binding domain | Interproscan |
| IPR018506 all species → | Binding_site | Cytochrome b5, heme-binding site | Interproscan |
| IPR022407 all species → | Binding_site | Oxidoreductase, molybdopterin binding site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19372 all species → | SULFITE REDUCTASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0030151 all species → | Molecular Function | molybdenum ion binding | Interproscan |
| GO:0020037 all species → | Molecular Function | heme binding | Interproscan |
| GO:0043546 all species → | Molecular Function | molybdopterin cofactor binding | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006790 all species → | Biological Process | sulfur compound metabolic process | Interproscan |
| GO:0008482 all species → | Molecular Function | sulfite oxidase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00387 | SUOX; sulfite oxidase | EC:1.8.3.1 | Sulfur metabolism | ko00920 | deepkoala |
Genes whose expression across the transcriptome samples of Micromussa lordhowensis tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Micromussa lordhowensis, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
