Gene detail

Detailed information of ENSSYXP00000034156.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: KAJ7388681.1, Acyl-coenzyme A oxidase (Acyl-CoA oxidase) [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSYXT00000035978

ATGAAGGCATCTAGTAACAAAGTGAATCCCGACTTAGCGAAAGAGAGAGGGAAAGCTTCATTTGACACAGCAGAACTCACCTACCTTCTGTATGGAGGACGACAGAAGACGGAGAGAAAGAGATTCCTAGAGTCTTTGTTAGTGACGGATCCTGTGTTTAGCAAGGAAGATGCATATGTCCTGGACCGCAAGCATGCTTATGAGAGGAATTTACAGAAAGGATTACAAATCACTGAACTGGCCAAGAAATATCAAATTACGGATCAGCAGGAGTTGGGCATGTTAGAAAAGTTTGCAGGTTCAATTTTTCCATTTCACCTCAGCAGAGTTATGTTTATTCCCACTTTAAAGAGTcagggaacagaggaacagaaagCCAAGTGGCTGCCTTTAGCAGAATCCTTTCAGATTATTGGAACTTACGCACAGACTGAACTAGGACATGGGACTTTTGTGCGAGGCCTGGAGACTACAGCAACGTACGACAAGACGACGCAAGAGTTTGTTATTCATTCGCCTTCACTATCAGCATGTAAATGGTGGCCAGGAAACTTGGGCAAGTCTTCAAATTTTGCTATTGTGCCTGCAAGGCTAATAGTAGATAAAAAGGATCATGGAATACAGATGTTTATAGTTCAGCTGCGGGATCGGCAGACACATCAGCCTCTACCTGGTGTAATGGTGGGAGATATTGGAGCCAAATTTTCAACAATCATGAATGGAACTGACAATGGATATCTACTGTTTGAGCATGTACGAATTCCACTCAACCAAATGCTGATGGGTTTAGCAAAGCTGTCCCCTGATGGCACGTTCACAAAACCAGTAAATTCCAAACTTTTGTATGGTACCATGACTTTTGTGCGAGCAGCCATTGTTTATGATTCCTACTGGTTGCTATCCCGAGCAATAACTATTGCTATTCGCTACAGTGCAGTGCGGAGACAGAGTCAGCTGAAACCAAGTGAGCCAGAGGCACAGATTATCACCTATAAAACCCAACAGTATAAACTGTTACCAGGTTTAGCCATGGCTTATGCTACAAAGTTTACTTTTGACTGTGTGTGGAGATCATTTGAAGAAATGCGAACGAAAATCGCTGCAGGAGACTTTTCTATGTTACCAGAGGTACATGCCATCACCAGTGGTCTTAAAGCGTTCTGCACATCAATATCCATGCACCACGCTGAGACATGTCGACTGGCTTGTGGTGGACATGGCTACTTACTGTACAGCGCTCTTCCTGAATTGTATACTGCGTTAAATGCTTCTTGCACTTACGAGGGAGATAATGACGTTCTTTACTTGCAAGTAGCTAGGCATCTTATGAAATGTGCTTCACAAGTTCAACAGGGCAAGACACCTCCTTTGTCACTTTCATTCTTGTCACGGAAACCAGAACTGTGTCCAGTAACAAGAGGCGAAGAATTCTTGGATCCTCGAGTGCAAAGGAAAATTTACCAGGATAGAACTTCACACGAGGTGATGGCTGTGGCGGAAAGATTGCAGACTAGAATCTTTTCTGGAATGGATTCTGCAGATGCTTGGAATGAAGTGTCCGTCGACTTAGGACGCTGTGCCAAGGGCTACAGTAACTGTGTAATGGTGCTAAATCTACTGGAATCAATGGAGAAGCTGCCTGGCGTGAGCTCAAGCTTACGCAGGGTACTCAAATCTCTGGCAGATTTGTTTGTTCTTTATTGCATTACTGAGAATTCAGGCAGTTTTCTTGAGGCTGGAGTTCTGAAAAGCGACCAGATTCAAATCATACGACAACAAGTGTACGACTTGATGGAAAAACTAAGGCCTGAAGCAGTGTCTCTGGTAGACGCCTTTGACCATTCAGATTACGTACTCAACTCACCGCTTGGACGCTACGATGGTAACGTGTACGAAGATCTTTTTAGATGGGCTCAGAGATCGGCATTGAATAAGGAAGAGGTTCAACCAGGTTACTACAAGTACCTGCGGCCATTAATGAACAGCAACAAAGCCAAGTTGTAG

Transcript

ENSSYXT00000035978

TTTCTATCACTCGAGGCCGAGCCGAGGCATCGTTAATTATAGCGAGGAGGCTCTGGTTTGTACACGACCTTCCAAACAAGCTTAGTGATTTGGAATCAGAGTATAATGAAGGCATCTAGTAACAAAGTGAATCCCGACTTAGCGAAAGAGAGAGGGAAAGCTTCATTTGACACAGCAGAACTCACCTACCTTCTGTATGGAGGACGACAGAAGACGGAGAGAAAGAGATTCCTAGAGTCTTTGTTAGTGACGGATCCTGTGTTTAGCAAGGAAGATGCATATGTCCTGGACCGCAAGCATGCTTATGAGAGGAATTTACAGAAAGGATTACAAATCACTGAACTGGCCAAGAAATATCAAATTACGGATCAGCAGGAGTTGGGCATGTTAGAAAAGTTTGCAGGTTCAATTTTTCCATTTCACCTCAGCAGAGTTATGTTTATTCCCACTTTAAAGAGTcagggaacagaggaacagaaagCCAAGTGGCTGCCTTTAGCAGAATCCTTTCAGATTATTGGAACTTACGCACAGACTGAACTAGGACATGGGACTTTTGTGCGAGGCCTGGAGACTACAGCAACGTACGACAAGACGACGCAAGAGTTTGTTATTCATTCGCCTTCACTATCAGCATGTAAATGGTGGCCAGGAAACTTGGGCAAGTCTTCAAATTTTGCTATTGTGCCTGCAAGGCTAATAGTAGATAAAAAGGATCATGGAATACAGATGTTTATAGTTCAGCTGCGGGATCGGCAGACACATCAGCCTCTACCTGGTGTAATGGTGGGAGATATTGGAGCCAAATTTTCAACAATCATGAATGGAACTGACAATGGATATCTACTGTTTGAGCATGTACGAATTCCACTCAACCAAATGCTGATGGGTTTAGCAAAGCTGTCCCCTGATGGCACGTTCACAAAACCAGTAAATTCCAAACTTTTGTATGGTACCATGACTTTTGTGCGAGCAGCCATTGTTTATGATTCCTACTGGTTGCTATCCCGAGCAATAACTATTGCTATTCGCTACAGTGCAGTGCGGAGACAGAGTCAGCTGAAACCAAGTGAGCCAGAGGCACAGATTATCACCTATAAAACCCAACAGTATAAACTGTTACCAGGTTTAGCCATGGCTTATGCTACAAAGTTTACTTTTGACTGTGTGTGGAGATCATTTGAAGAAATGCGAACGAAAATCGCTGCAGGAGACTTTTCTATGTTACCAGAGGTACATGCCATCACCAGTGGTCTTAAAGCGTTCTGCACATCAATATCCATGCACCACGCTGAGACATGTCGACTGGCTTGTGGTGGACATGGCTACTTACTGTACAGCGCTCTTCCTGAATTGTATACTGCGTTAAATGCTTCTTGCACTTACGAGGGAGATAATGACGTTCTTTACTTGCAAGTAGCTAGGCATCTTATGAAATGTGCTTCACAAGTTCAACAGGGCAAGACACCTCCTTTGTCACTTTCATTCTTGTCACGGAAACCAGAACTGTGTCCAGTAACAAGAGGCGAAGAATTCTTGGATCCTCGAGTGCAAAGGAAAATTTACCAGGATAGAACTTCACACGAGGTGATGGCTGTGGCGGAAAGATTGCAGACTAGAATCTTTTCTGGAATGGATTCTGCAGATGCTTGGAATGAAGTGTCCGTCGACTTAGGACGCTGTGCCAAGGGCTACAGTAACTGTGTAATGGTGCTAAATCTACTGGAATCAATGGAGAAGCTGCCTGGCGTGAGCTCAAGCTTACGCAGGGTACTCAAATCTCTGGCAGATTTGTTTGTTCTTTATTGCATTACTGAGAATTCAGGCAGTTTTCTTGAGGCTGGAGTTCTGAAAAGCGACCAGATTCAAATCATACGACAACAAGTGTACGACTTGATGGAAAAACTAAGGCCTGAAGCAGTGTCTCTGGTAGACGCCTTTGACCATTCAGATTACGTACTCAACTCACCGCTTGGACGCTACGATGGTAACGTGTACGAAGATCTTTTTAGATGGGCTCAGAGATCGGCATTGAATAAGGAAGAGGTTCAACCAGGTTACTACAAGTACCTGCGGCCATTAATGAACAGCAACAAAGCCAAGTTGTAGTTGAAAGTAAAACAGCTCATTTACTGTGAAGTAACAGTCAAACTTCCTCCTCCGCTGAGGTCAAAGGggtttttcgggtggggagaaTCTActgatccattcgactttgcaCCTGCACTGACCTCGCACAACGGTTTTCTATAACAAACGTTTTGAACCTCAGCGGAGGAGAGAGGCCTGCGGAGGAGCGCTATACAAGTATACCGAAAATAAATTGAATGCGATTATTCTTGGAAGTTTAATTGATAAAAATATTGTATTACTCAACATTATAGCTTGGTTTGCATAACGTTTCGAACTTGCAAGTGGTGTGAATTATGGGGTTTTCGCACAGTCGTTGCCAGGCAGCGTGACGTAACACAACACCATGCACATAAGTCGCCTTATTCTGTTGGTAATTGGAGAATTTAGAATAGAAAACCTTCGCTTGTGATGCATTAGGTTGATTCAAAATATTTGTATGATTTGACGTGACACACGTTTGTAAGTGCATCAGATCTTTATagcaatgaaaaattcataggaGACGAACAATTCATTGACGTTTTACAATCACTAGCAGCAACAAAGTTTTTAGTTGAACTAGGCTTTAGTCGTTTTAATTCACATTTCATATACATGTGAGGTAGCAGAACAATCCACACACTACTCGCAGCTCTCGCTCTTTTCGTTATCGGAGTTCAGTCCGTCAAACAAAGAAGATCAATTCCGGGATTCGCAGATGTAAATCGCGTCCTTTCATTCCCTTACTTGGGTGTTATTCGGAGCAGGAGTTTAGACGATTGGCACTCGTTGACCGAGTATTCTATTCATTACTTCTTCTCTGCTACAAAAGCTTTTTATATTCAGGAGGCGAGTAACATGAACCCACATGTAACGAAGTCATACCTTTTAATCCCCGTTGCTGAGAATTTTGAAACACTCAGAAGCTACTTTA

Protein

Uniprot

Uniprot term	Description
Q8HYL8	Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus OX=38626 GN=ACOX1 PE=1 SV=2
P07872	Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1
Q9Z1N0	Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus OX=10141 GN=ACOX1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14749	Acyl-CoA_ox_N	Acyl-coenzyme A oxidase N-terminal	Domain	Interproscan
PF01756	ACOX	Acyl-CoA oxidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR037069	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	Interproscan
IPR029320	Domain	Acyl-coenzyme A oxidase, N-terminal	Interproscan
IPR012258	Family	Acyl-CoA oxidase	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR002655	Domain	Acyl-CoA oxidase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10909	ELECTRON TRANSPORT OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0003997	Molecular Function	acyl-CoA oxidase activity	Interproscan
GO:0005504	Molecular Function	fatty acid binding	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0033540	Biological Process	fatty acid beta-oxidation using acyl-CoA oxidase	Interproscan
GO:0055088	Biological Process	lipid homeostasis	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00232	E1.3.3.6, ACOX1, ACOX3; acyl-CoA oxidase	EC:1.3.3.6	Alcoholic liver disease	ko04936	deepkoala