Gene detail

Detailed information of ENSSYXP00000035112.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020610323.1, myelin expression factor 2-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSYXT00000036983

cggaccacgaGGAATTGTATTCTAGTCGACGTGACGATTCCCCCGTTGATCACGACTCGAGAAACGAGAGAGAAGGAAGCAGGGAAAGCGATCACGACGATAGAGATCAGCGGAGAAGAGGCGGTGGATACGAGCGGGATCTGAGACGCGAAAGTCGACGCTTCGCTCCATACCCTTCACAAGATGAGAGGTCAAGTTCGAGAGGACAATCTGGTGGCGGAGGGAGGGAATGCCGGGTTTACGTGTGGAATCTTCCATACCAAGTAAAATGGCAGGATTTAAAGGACTATATGAAGAAAGcTGGTGAAGTGGGATTTGTTGACATCATAGTGGACAGTCGAGGAAAATcaaagGGTTGCGGTGTTGTTCAATTCCGGCATAGAGAAGATGCAGAGAAAGCAATTAAAGAACTCCATGGTACTGAATTCAAAGGGCGAACAATCCACATACGAGAGGATAGTTTTGAAGAAAGTGAAAGACGTAGCAGGCCTTCTTCTAAAGGATCAGACCTTCCCTCCCTTACTGGAGGGGGCATGTCACTCGGCAACAGTTTTGGTAGTGGACTTGGGAACGGAAATCTTGGCCTGGGGTCTGGAGCTGGGCCTCTTGGGAACCTTGGTGGGCTCTTGGGCTTGGGAAACCTTTCTGCAGCTCAGGGAATCAATTACCGGACTGATGCCTTGTCTTGCACAGTGTTTGTCAGCAACCTTGACTACAATGTAACTTGGCAGAAACTTAAAGACACATTCCGAGGAGCAGGGAATGTCATTCGTGCAGATATCAATCTAGACTCAGACAATAAATCCAAAGGATTTGGCACAGTACAATTTGAAACAGCAACGGAGGCCATTAATGCTGTCTCTATGTTTCATGGGCAGATTCTCAGCGACAGAGCTATGAGTGTCAGACTGgatCGCAATGCACCGATCATGCAGCAATTGACCAATGTGGGCATGAACAGTACAACCATGGGCCGAGCTGGAGGAAACATGAACCCCATGGCTGTCCTTCAACTGTTTCAGAGTCTCCAAGGGCTCAGTACACTTGCTCAGTTGACCAGTAATCTTGGTGCGTTGAGTGGTAACAGTGGTGGTTTGGCTCCTGGTGCGGGTATGGGCAACATTGCTGGTGGAGCTGCTGGTATGCCGGACACCACTGGCGCTAATCCTCTGGCTGCACTTGGTGGATTGGGGATGCTCGGGAGCACTCTTGGGCTTGGTGGCGGAGGAGGTGGGGGCAATAGTGGGATCGGTGGGCTTGGTTCATCGCACCACAACGACAGCGGAACCTCGGGAAGGCAGGTGTTTGTGAGAAATCTTCCTTGGCGGTACACCTGGCAAGACTTAAAGGACAAGTTCAAAGGAGCAGGAAGAGTGGTTCGTGCAGACATTATGACAGAATCCAGTGGAAGATCCAAGGGTTGTGGTACTGTACTGTTTGAGACTTCTGAGGACGCCGCTCATGCAATAAGTATGTATAATGGAGCATTGATTGATGGCCGTGAAATTGATGTGAGGATGGATCGGTTAGGCTGAAGTGAGGCAGGCTGCTGGGCTTGAAAGCTTTGTGGAATGAAGATTGCTGTTGTCTAATGCTTCCCTGTGGCTTGTGCTTGATTTTGTTGATCTTCTGATCGTGTAGTTTTTATATAGTGGATTCGACATGTAGAATTGGCCTGTAAATAGAAGTCATCCAGTTAGTGGTTCATCAAGCACTTCAGCATGACGGATTATTGGAAATTGTTTAGTCTAAGCAAGGTTTCAAGTGCTCCTTGGTTCATTTTTATCTGGGCTTTGAAgcattgttttattttgcataTCCATTGCAGTTATTGCTTCAAGGATGTTTCCAGGTTTTTGACTTACAGGAAAATAATGTGCACTATCCCTTTTCTATTGATTTTGGAGTCACTTCCTTGCACTTCCATTCCATTTTGTTGTGAATAGACATTAATTCAGTCTGGCAGTTGCAGAATACGTGCAGAAGTTGTCTGGTCTTAGGTTGATGAACTGTTTTTTATCGTTTTACCAATTGATTTATTTTACCTTATTCTTGAGGAAACATCACTTGCTATTTTACGTGTGGTGAAACAAAAGCTGTTACGAAGTGCGCAGATATGTCCTTATCCTTAATTAGGAACATCTCAAATGGAAACCTTGTTGTTCACTTTAAGGTTGAGACATTTGTTGTAGAGATCAAGCGTCTGGTAAAATGACATTGAAATTGAATGGCTtgcttgtttgtgttgttttctttctttgggTGGCAGTGGTGTGGTAGGGATGTGTGTTTTGGGGGTTGGGAATGGCCTGATGTACCTCTTTGAGTGTGTTAAGGTCATAACAAGGTCATAACATGGGTGTGG

Protein

Uniprot

Uniprot term	Description
Q8C854	Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1
Q9P2K5	Myelin expression factor 2 OS=Homo sapiens OX=9606 GN=MYEF2 PE=1 SV=3
A0A0D1DZT6	Serine/arginine (SR)-type shuttling mRNA binding protein OS=Mycosarcoma maydis OX=5270 GN=RRM75 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR050374	Family	RRT5/SRSF/Splicing Factor SR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24992	MYEF2; myelin expression factor 2	-	Transcription factors	ko03000	deepkoala