Gene detail

Detailed information of ENSSYXP00000035967.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020628525.1, F-box/WD repeat-containing protein 2-like isoform X1 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000037863

ATGGCCTCTACAAACGAGCATACTAAAGAGCAACTGAACTACTACAGGATTTGTTATGTGATGACTGACATCCTAGCTGATGGCCTGCGATCAATCTTCAAACAAGAATGGGACAATCTCTACGAGAGCACTAAGGGAGAATGGAAAGATGAGCCTAGAAATGGACTCAACTTTTGGAATGGGGAATCTCCTGATAACAAACGTAAACATGCCCATCTTCTGACCACCATGGTAAATGGAAATAGAGCAGAATGGAATTGTACCATGCTGTTTTATGCCATCCTCAACTctgactctatccaccttctAAGTCCAGCAGTCCAATCAAATGTGGAAGAACTCCAAAAGCTCAGAAGAGAAGAATTTACAAACATGCCAGAAGACCATCTTACCGATACAGAGTTTGAAAATGCCATCAGCAAAGTTGATGTTGCCTTCCAAGCCCTCGGTCTGCCAACTGAGCAAATTCAAGCAATCAGAAATCAGACAAGTTTTGCCAAGGAGAAATTAAGAGATGTCTTGAAAAAGGTTACCAGCTTAAAGCAGAACGAAAGTCAGGTTGATGAGGTTACTACGTACAGTGACTTGGGTAGTATACACAATCACTTGAGTGACCTAGACAAAGCAAAAGAGTGTTATGATCTTGCCCTGGCCATTCGTCTAGAAAAACTTGGAGCTGAGCACATCAATGTAGCAACTACTTACAATAAGCTGGGCAACGTGCACCTTCATCTGGGTGACTTTCAGAAGGCAAAAGAGTATTTTCATTGTGCATTGGCAATCGGTCTGAAAAAGCTTGGAGCTGAGCATGGTGATCTTGTAACCACTTATAATAACCTTAGAGACGTTCACATTGAGCTGGGTGAATTGGAGCAGGCAAAAGGTTATTACGATCACGCACTGGCCATTGCTTTGAAGGAAGGAGCTGAGAATGGCAATGTTGCAGTGACCTACAATAATCTGGGAAATTTGCACAGTGACCTGGGCGAACTGGAGAAGGCAAAAGAGTATCTTGATCATGCACTGGCCATTCGTCTGAAAATTCATGGCCCTGAGGATGTTAATGTCGCAGGTTCTTACAGTTGCCTGGGTAATGTACACCTTCAGCTGGGTGACCTGAGGCAGGCAAAGGCGTATCAAGATCATGCACTAGCCATACGCCTGAAGAAGCAAGGCCCTGAACATCTTGATGTGGCTATGACTCTAAATAACCTTGGCAATGTGTATGAAAACGCTGGTGGCCAAGAGCAGGCAAGAGAATACTTCAATCGCGCTCTGGCCATACTCCTCCAAAAGCTAGGCCCTGAGCATGTCCATGTCGCAGCTACTTACAACAACCTGGCCAATGCTCACATGAACCTGGGCGATCTGGAGCAGGCAAAAAACTACTATGATCTTGCATTGGCCATTCGTCTGAAAAAGTTTGGACCTGAACATATTAATGTTGCAAATGCTTACAACAACCTAGGTACTATACAcagagccctaggaaacctgAAGCAAGTCAAAGAGTATTGTAATCTTGCCCTGGCCATCCGTTTGAAAAAGCAGGGACCTGAGCATGTCGATGTCGCATCTACTTACAACAACCTTCATTGTAACCTGGGCGTCGTACACACAGACCTCGGTGACCTGGAACAGGCAAAAACGTGTTACGACAATGCACTTGCCATTCTTCTGAAGAAGCTTGGGCCAGACCACTCGAATTTTTACGATACTTTTAGAACTCTGTCAGATATCCAGAAAAACTACACCATTGAAGGAATTTTAGACATATGTGGACCAGAACAGCTGCGTTTTCTTTCCACAAAACTCGAAATACTCGTAAAAAGGGACTACCTCAAATGTTTACCTTTGGAACTGAGTTTTCAAGTGTTGAAATGGCTGGACCCAGTATCTCTCTGCAACTGCTGTCTTGTGAGTAACAAATGGAACAAAGTTATTCTCAGTTGCGACGACGTTTGGCAAAACGCCTGCAGACGGTTGGGCATGGAAGTTAACGATGATTCTGAAAGAACTTCATCTTCTGTTACCTCGTGGAAGCAGATGTACATTTCACacttaaaaaatatgaaaaagttaaaagataTAGACGCTGTGGAGAAGAAACAATTTTATGGCCACACAGCCCGGGTGTTTGCACTATACTGCCGTGGAAACTACCTTGCAACTGGATCAGATGACAGATCAGTCCGGCTGTGGGACTTAAAGACTGGCCAATGTAAATATGTTCTGAAAGCTCACACTTGTGCGGACATTTGCTTTGATGACCACAAGGTTATTACAGCATCTTTTGACAATACTGTTGGCATGTGGGACTGGAACACAGGAGAGAACTTACAGTACTTTAGGGGACACACTGCAGCAGTGTTTACCGTTGATTACtgtgatgaagtggacacaatTGTAAGTGGTTCTGCTGACTCTACCCTCAGAATATGGAAAATGTCATCTGGACAGTGCCTGCAGACCAGATATGGACACTCAGACTGGGTGATAAAGGTTATCCTGACAAGAGCTGAAGTGGAATCACAGACTCATGCAAAGAACCAGCTTGTGATAATTAGTATGGACAAATGTGTCGTCAAGATCTGGTCTCTCAGCCATGACTGCGAAAAATGTCTGGCGACTTTGAGTCCTTTAGAGTCAAATAATCACCTGCAGCCGCGCCTTCAGTTTGATGGACAGACCATAGCGTGTGCTTCAGAAACAGGGATACTGCTCTGGGATTTCAAAACTCTGCAAATGACAAGGGTCTTCACTGAATCCCCTGCGCAGTGGCTGGTAGCCTATGGACATGTGTATAGCCTGCTAATGGACATGAACTCGTTGTATTTGGTAAGCACTAGGAGTGAAGAAATTGTTGCGGAGTATTCTCTTCCTCCTTTTAGAAGGTCTGTACGCGGCTCAAACTTTACTCCGGGTCAAACTGGCTGGCTGGACGGGAGACTGGGCGTGCCCCGAGAAAGCCTTGTTTTCGCCACAAGCATGCCGGACTACAGTGTTTTACTGCTCATGCTCAAAGAAGGCACGTGA

Transcript

ENSSYXT00000037863

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2RZ17	F-box/WD repeat-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fbxw2 PE=2 SV=1
Q9UKT8	F-box/WD repeat-containing protein 2 OS=Homo sapiens OX=9606 GN=FBXW2 PE=1 SV=2
Q58D00	F-box/WD repeat-containing protein 2 OS=Bos taurus OX=9913 GN=FBXW2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009690 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13374 all species →	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR042627 all species →	Family	F-box/WD repeat-containing protein 2	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44436 all species →	F-BOX/WD REPEAT-CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000035967.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.