Gene detail

Detailed information of ENSSYXP00000036514.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: RMX47769.1, hypothetical protein pdam_00011792 [Pocillopora damicornis]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4KLT0	E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis OX=8355 GN=rnf217 PE=2 SV=1
D3YYI7	E3 ubiquitin-protein ligase RNF217 OS=Mus musculus OX=10090 GN=Rnf217 PE=1 SV=2
Q8TC41	E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens OX=9606 GN=RNF217 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002576 (this species only)
Ubiquitin family	E3\|E3 activity RING\|U-box · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 activity\|RBR · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11789 all species →	zf-Nse	Zinc-finger of the MIZ type in Nse subunit	Domain	Interproscan
PF01485 all species →	IBR	IBR domain, a half RING-finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004181 all species →	Domain	Zinc finger, MIZ-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR044066 all species →	Domain	TRIAD supradomain	Interproscan
IPR026846 all species →	Family	E3 SUMO-protein ligase Nse2 (Mms21)	Interproscan
IPR047552 all species →	Domain	E3 ubiquitin-protein ligase RNF217, Rcat domain	Interproscan
IPR047551 all species →	Domain	E3 ubiquitin-protein ligase RNF217, BRcat domain	Interproscan
IPR002867 all species →	Domain	IBR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21330 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0016925 all species →	Biological Process	protein sumoylation	Interproscan
GO:0019789 all species →	Molecular Function	SUMO transferase activity	Interproscan
GO:0030915 all species →	Cellular Component	Smc5-Smc6 complex	Interproscan
GO:0061665 all species →	Molecular Function	SUMO ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000036514.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.