Gene detail

Detailed information of ENSSYXP00000037366.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020629592.1, N-sulphoglucosamine sulphohydrolase-like [Orbicella faveolata]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000039331

TGAAGAAGGAAATGTGTTGTCTAGAGTCCGCTCGATTTGGTTTTTTAATATTGCTGATCTCGATAACTTTTTCCAATGCAGACAATTTTGATAAGCGGAAGAATGTTTTGGTTATGATTGGAGACGATGTGGGTTTCCAAACCCAGGTTTACAATAATACTGTTTGCAGAACTCCAAATTTGAACGCTTTTGCAAAACGCAGTGTCACTTTCAAGAATGGCTTCACATCCGTTAGTAGCTGTTCCCCGAGCCGGTCAGCCATCTTAACAGGACTTCCACAGCATCAGAATGGTATGTATGGCCTTCATCATTCATACCATCACTTTAACTCCTTTGATGCAGTCAAGAGTCTCCCTTTGGTGTTACAGAAGAATAATGTGCGAACTGGAATCATTGGCAAGAAACATGTAGGACCTGAAACAGTTTATCCATTTGACTTTTCATACACTGAACAAAACTGTAACCTCCTGCAGTGTGGCCGCAATATCACCCACATGAAAGATCTTGCTCGAAAGTTTTTTCAAGGATCACAGAATGACTCTCGACCATTCCTTCTGTATATTGGGTTCTTTGATGCCCATCGCAGTACAAACCAACCCAAATATGGACCATTTTGTGAGAGGTTTGGAAATGGCGAGCCAGGCATGGGAGTTATACCGGATTGGAAACCACTACACTATTCCCCTGAGGAAGTTGAGGTTCCGTTTTATATACAAGACACACCAGCCGCTCGGGATGAGATTGCTAAGCAATACACTTCAGTCAGCCGTCTTGACCAGGGAATAGGGCTGATACTAGAAGAACTTCGCCTGGCAGGCTTTGAAGAAAACACCCTGGTCATTTTCAGCTCTGATAATGGGATCCCTTTTCCTGGTGCGAAGACTAACCTTTATCATCCTGGAATGGCTGAGCCCTACCTTGTTTCGTCCCCTGAGGCCCCTGAACGTTGGGGTCATATAAGTGACGCCATGGTGAGCTTATTGGATATAGTGCCTACTGTACTGGATTGGTTGAAAATTGACTATCCTACTTACATGCTGTCTGGATCGAAGCCAGTGAAGCTGACTGGTAAGTCTGTATTACCAGTCCTACATCAAGAACCGCAGCAAGGATGGGATACAGCTTTTGCCAGTCACGACTTACATGAAGTGACAATGTATTATCCAATGAGAGTactgcagaagaaaaatttcaaGCTTATTCACAACCTTGCCTACAAGATGCCTTATCCCGTTGCCTATGATATCTTTAGATCCGCTACTTACCAGGACCTTTTGAATCGCACACGAGAGGGGAGGCCCACGGGATGGTTTCGCACACTGGAGAAGTATTATTATCGAGCACAGTGGGAACTGTTTGACTTAAACACTGACCCTAAAGAGCTGACAAACCTGTTTGATAAACCGGAATATCAGAAAGTGGTGAAAGAGCTGCGCCTCGAGCTGCTGGCTTGGCGAGAGACAACTAATGATCACTGGATATGCTACCCAGGGGGGGTCCTTGTGGATGGTGCTTGTTATTCCATGGATAATGGCCAGTGATCTGTGGCTTTTATTGTGAACCCTGCCCTATTTTGTTAATGATCGTAATATGTAACCATTTATTGATTGAAATCGTTAGCATTAATAGAAATGCGGCATATAGTCAACTCTTGTcaaagcggacaccctcgggactgTCATTTGGTGTGCGTAATAGCCAGAGTTCGCAGCAGCGGGGTGTGATGAAAATGACCCAATGTTTGGTTTGTGAAATGTCACATATAACCTATGCGGCTAGAATCTTTAAAGGTTttcagttgttgtttttttttaatttgtggtACACATTTACTGTGATACACAAACTAGTACCATTCCAAGTCTAGAAGAATTACCGATGTCAATCAAAACGTCCAAGTTGTCAACAATTAGTTACAACTAGAGTagaacaagaaacattttcgTCTGGGACTTCATGAAGTGTCCGCAATTCCGTAACAGCGATAGTTTCGGCCAGGGATGTATCTTCTGTCTGTAATAAGGGGATGTCCGCAAgaagagagttgactgtaagtAGAATTTATTGAAGTTTGACTTCAAGTATTAACCTTCCCTGTAATGTATTTACTGCGCGTTTCAATAACACGCGAACTCACAAGTTAAAATCTTTACTAACAACTGCGCTTTTGGCTGCCGTCAATTCTCATTGCGACGACAACCAACGAATCTggatagaaaaaaagaaaaactgctaAGATGGAttgaaatccaccaatcacaaccCACAGTCGTGACCTTTCAACCCTCTGATGTAGACGTCTATAAGTTTATTTTCCTGAGAGACACAACACGAAATCGTTGACAGAATAAGCTTTCGCGTGTTGTTGAAAGGCCTAGCGTAGTAATACTGAATTGCAAGCGAACttgttttttcaaattttaaaatagtCCACGCTTAAGTATATGTAGACTCTAGAAGGGAACTAATCGGGGTGCATGGTCATTTTGGTGTGTTTTAAACTTGAACACTTAATATATTACAAGTGAATCACTATATTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P51688	N-sulphoglucosamine sulphohydrolase OS=Homo sapiens OX=9606 GN=SGSH PE=1 SV=1
T2KN90	Ulvan-active sulfatase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22210 PE=1 SV=1
Q0TUK6	Arylsulfatase OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=CPF_0221 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004503 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00884 all species →	Sulfatase	Sulfatase	Family	Interproscan
PF16347 all species →	SGSH_C	N-sulphoglucosamine sulphohydrolase, C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR000917 all species →	Domain	Sulfatase, N-terminal	Interproscan
IPR032506 all species →	Domain	N-sulphoglucosamine sulphohydrolase, C-terminal	Interproscan
IPR024607 all species →	Conserved_site	Sulfatase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43108 all species →	N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005539 all species →	Molecular Function	glycosaminoglycan binding	Interproscan
GO:0006027 all species →	Biological Process	glycosaminoglycan catabolic process	Interproscan
GO:0008449 all species →	Molecular Function	N-acetylglucosamine-6-sulfatase activity	Interproscan
GO:0016250 all species →	Molecular Function	N-sulfoglucosamine sulfohydrolase activity	Interproscan
GO:0030200 all species →	Biological Process	heparan sulfate proteoglycan catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01565	SGSH; N-sulfoglucosamine sulfohydrolase	EC:3.10.1.1	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.