Gene detail

Detailed information of ENSSYXP00000040549.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020620205.1, methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X1 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000042730

ATATCCTGTTATGCTTAAAGCTGTAAGAGGTGGTGGTGGAAAgGGAATGAGGATCGTTATGAAGCCAGACGATTTTGATGATGCTCTGGAATCGGCCAGAAGGGAATCTCTTAAGTCCTTTAATGATGATAATATGTTAGTGGAAAAGTTTGTCGACACACCAAGGCACGTAGAGGTTCAAGTATTTGCTGACACCCTTGGGAACACTGTGTACTTGTTTGAGAGGGACTGCAGTGTTCAGAGAAGACACCAGAAGATCATTGAGGAGGCTCCTGCTCCGGGTGTGTCCTCTGAGGTGCGGCAGAAGATTGGTGAAGCAGCAGTGAAGGCAGCAAAGGCTGTTGGTTATGTTGGAGCAGGGACTGTTGAGTTCATTATGGATAAAGACCAAAAATTCTACTTTATGGAAATGAACACTCGATTACAAGTTGAGCACCCTGTGACAGAGATGATCACAGCACAGGACTTGGTTGAGTGGCAGCTGAAAGTAGCAGCAGGAGAGCAGTTACCACTTCTACAAGAGGACATCAAACTAATGGGGCATTCATTTGAGGCCAGGATTTATGCTGAGGACCCTGAGAGtgaCTTTCTTCCAGGAGCTGGCCCTCTGTTACATCTTTCAACACCTCAGCCATCTGATACAATCAGAGTAGAAACAGGGGTGAGGCAAGGTGATGAAGTATCAGTGCATTATGATCCAATGATTGCTAAGCTTGTGGTATGGTCAGAAAACAGAGAACAGGCCCTGAGTTTACTGAAAGAATCTTTACAGCAATATAATATTGTAGGATTGAACACAAACATTAGCTTCTTATCGAGTCTGTGTGAACACGGCCATTTTAAAGCAGGAGACGTTCACACTGACTTCATAAAGCAACATTATCAAGACCTGTTTCCCGCGAAGGTACCGCTGAGCCGTGAGATGCTGGCTCAAGCCAGCTTGGGACTTCTTCTTTTCGAAAGACAAGAGCAAGAAAGTCGAGCTACACTGGTGAACGATCCGTTTTCGGTGTGGAATTCTACCACTAGTTTTCGAATAAACAATGTCGCTAAAAGGAGAATACGTCTCGATGATGGCGAGAAAAAGGTCTATGTTATTGTTTCTTACAACAATGATGGAAGTTTTACTTTAGAGATCGAAGGTCGACGCATGCTTGTAAAGGGAAAGCTGCAATCAGAAGGCTCAAAGATCAGCCTCATAGCCAATATAGATGGACGTATCTTTAAATCTTGGCTAGTCGATCAAGAGGGAACTCTGCACTTATTCACCAAGGACGGCTGTCACAAGGTTCGTCGCCCGGTTCCCAAGTTCCTTAGGGGTGGTCCCTCGGGAGTTTCTCAAGGTTCCGCAGTGGCACCAATGACTGGTACTATTGTCAAGGTGTTTGTTGAGCCAGGACAGAGTGTCGAAGAAGGGGAAACGTTGATCGTTATGGAGGCAATGAAGATGGAGCACGTCATAAGAGCACCAAAAGCTGGTGTAATAGAAAAAGTACTTTACGCTACCGGCCAGTCCGTGAAGAGACATGCGCAGCTGGTACAATTCCAAGAACAAGGTCAAGAAGAAAAGGAGGAGGACGCGGACGAGGAAGGGCCCGAGGCCGAGTGAGAAGAAAAACCAATACAGCGAGGTGGACTGGTACGAGGATACTACGCGAGGAAGACTGGGTTTCAAGAATTCCATGTCAAAGACAAATTTAAATTCAAGAGACTCTAATCAGTATTACGGTGATCGATCGCTTTCACACTTTGCTAAGTTAGCTTGGACCCTTTGTAAAGAGGAACAAAGTTCCCGAATAAAATGTAAACAAGAGGGGACATAAATCGGTGTATAGTAcagtttattatatagacacgagtgttttactggaaaatacatcactcgtaaaattcataccaAAACGACGTCCGGGACTCGggtggcatattttccatatcctcacaagtgaggatatcgatgatttcactgatatcaagtttgtctcttaaattgtacttcaattcgttggtgtatgatcgaaacatttTCGGGTCTTCAAGTGTTCgacaatcttcggaaattttctgAAAACGTTCGGCAACGTTCGTGTGACCTTTGGAcaagttttggagaatcttcggaaatcttcggaaaagcGTCGTCATCAGTGTGTCtataataaaaagaatatttggaTATTTATATCACCGCAGCTAATTGCTCGTTTCCATGTGTACTGGAGGATTTTAACGAACGACTTGGTCGTAATACTGATCAGACTGTAATTTCTCCTTTGGTAATGGTACGTAAAGAATCAAGTAGCCATTTAGAGTTAGAAAAAGATAAccgaagtaaaaaattatttaagGATTGCAAGACATGTATTGAGGCGAGACTGATAGGGAGAACTTGTATGTTGACCCGATTTAAACCTTCATTCACATTTTAAACAACActggaaataaatattttaaaaataaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96RQ3	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=MCCC1 PE=1 SV=3
Q5I0C3	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1
Q99MR8	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001401 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00364 all species →	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan
PF02786 all species →	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF02785 all species →	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001882 all species →	Binding_site	Biotin-binding site	Interproscan
IPR011764 all species →	Domain	Biotin carboxylation domain	Interproscan
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR011054 all species →	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR005479 all species →	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR050856 all species →	Family	Biotin-dependent Carboxylase Complex	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan
IPR005482 all species →	Domain	Biotin carboxylase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18866 all species →	CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004485 all species →	Molecular Function	methylcrotonoyl-CoA carboxylase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01809	manA, MPI; mannose-6-phosphate isomerase	EC:5.3.1.8	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.