Genomic Location: chr11:8211786...8289950
NR annotation: PFX23682.1, Homeodomain-interacting protein kinase 2 [Stylophora pistillata]
Species Micromussa lordhowensis · all data for this species · gene families
| CDS |
| ENSSYXT00000042774 |
| Transcript |
| ENSSYXT00000042774 |
| Protein |
| ENSSYXP00000040592.1 |
| UniProt accession | Description |
|---|---|
| Q9H2X6 | Homeodomain-interacting protein kinase 2 OS=Homo sapiens OX=9606 GN=HIPK2 PE=1 SV=2 |
| Q9WUM7 | Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus OX=10036 GN=Hipk2 PE=1 SV=2 |
| Q9QZR5 | Homeodomain-interacting protein kinase 2 OS=Mus musculus OX=10090 GN=Hipk2 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006080 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18359 all species → | Tudor_5 | Histone methyltransferase Tudor domain 1 | Domain | Interproscan |
| PF00069 all species → | Pkinase | Protein kinase domain | Domain | Interproscan |
| PF00856 all species → | SET | SET domain | Family | Interproscan |
| PF18358 all species → | Tudor_4 | Histone methyltransferase Tudor domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008271 all species → | Active_site | Serine/threonine-protein kinase, active site | Interproscan |
| IPR002999 all species → | Domain | Tudor domain | Interproscan |
| IPR051516 all species → | Family | Histone-lysine N-methyltransferase SETDB | Interproscan |
| IPR041291 all species → | Domain | Histone methyltransferase, Tudor domain 1 | Interproscan |
| IPR046341 all species → | Homologous_superfamily | SET domain superfamily | Interproscan |
| IPR000719 all species → | Domain | Protein kinase domain | Interproscan |
| IPR017441 all species → | Binding_site | Protein kinase, ATP binding site | Interproscan |
| IPR001214 all species → | Domain | SET domain | Interproscan |
| IPR011009 all species → | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR041292 all species → | Domain | Histone methyltransferase, Tudor domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46024 all species → | HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004672 all species → | Molecular Function | protein kinase activity | Interproscan |
| GO:0006468 all species → | Biological Process | protein phosphorylation | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0010629 all species → | Biological Process | negative regulation of gene expression | Interproscan |
| GO:0046974 all species → | Molecular Function | histone H3K9 methyltransferase activity | Interproscan |
| GO:0051567 all species → | Biological Process | obsolete histone H3-K9 methylation | Interproscan |
| GO:0070828 all species → | Biological Process | heterochromatin organization | Interproscan |
| GO:0090309 all species → | Biological Process | obsolete positive regulation of DNA methylation-dependent heterochromatin formation | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
ENSSYXP00000040592.1.Genes whose expression across the transcriptome samples of Micromussa lordhowensis tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Micromussa lordhowensis, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |