Gene detail

Detailed information of ENSSYXP00000042188.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020623436.1, stromal membrane-associated protein 1-like isoform X4 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSYXT00000044450

CTCAAAGCCGGTTTTACGCAAGGCATCTTTGTTTGGCCATCTTGTTCGTGTGGACGCTCAGAAGATTGTGGCGTTTTACGGCGTCCATTGCCTTTGATTATGTCTTCTAAAGTACAGAAAGACAAAGGGCAGAAACAGAACTCAAATCAGGCTATTTTGTCGGAATTGCTAAAGGAGGAAGAGAATAGATACTGTTCAGACTGTGGAGCGAAAGGGCCGCGATGGGCGTCATGGAATCTGGGCGTTTTTCTTTGTATCCGCTGTGCCGGGATTCATCGAAACTTGGGCGTCCACATATCAAGAGTGAAATCCGTGAACCTTGATTCATGGACTCCCGAGCAGATGGAAAGCATCCAGCAATGGGGAAATAAGAGAGCTGCGGAGTTTTGGGAATGTTATCTTCCAAGTGATTTCCGTCGCCCTCAGACCGACTCAGCCATGGAGTCATTTATCAGAGGCAAATATGAGCGTAaacaatatttaaagaaagatgGATTACCCCCAAACAAGCCAACGAACACTTCTaccacaaaggaaacaaaatctATTGATAAGaaaaagagagagaagaaagaagaaggcATCACTATTACCCCTCTTAAAACTGAGGCCGAAAAGAAAATCTTCCTTCCAactgctcaacctcgtccacaTTCCCATCCTCCCCCAGTCAAGGCACCTGAGCCAGCTAAACCAGCTGCTCTGGTTGATTTGTTGTCTTTAGACACTCCAGCACCTGCTGCAGTGCCTGTGCCAGTGCCAGCAACATTGTCATCTGCTGGACTGTTGAACTCTCTGGCACAGCCTCCTGCTTCTCAACCTGCTAAGACTGGTTCAGCGAATGAGCTCAACATCCAAGTGTCTCAAGAATCGAATGAAGAATCCCTACTCAAGGACGATTCATTAACAAACAAGTCCACTAAAGACAGCATAATGGCATTATATGCACCAAAACCTCAAGGCAGTCAACCTCAGATGTATGGTGTTCCAGGTGGGATGTACATTGCCCCACAACAGCATCAGCAACAGCAGCCACCAAAGCCTCAGCTCAACCAACGGCTTGCTCTGTTGAACAGGGGGTGTGGAGTTCCTCCCCAGGGAATGCCTATGGGAATGGGGGCTCCCCATCAACCAGGATTCatgcaacaacagcaacaacaacaacagGTCGCCCAGATTCAGCAGCAGATGCAGCAGATGCGGCTCAAGCAACAAATGCCTCAACAAGCGAACATGCACAGTGCCAACCCAAGCCTGTTCGGACCTGCTCAGACACCAGTAGCGAATGGCTGGATGCCGCAGCAGCCTGTGTCATTTCCACAGCAGCAGCATCCTCAGTATGTTACCACGGGGCCCATGCCTGGGAACATGGGGTTTGGAAATTTCCCCATGGGGGCTGTACCTGGCTCAGGGCAAACTCTGAGTCACCAGTTGTGGAAATAATGAAGTTGTTCTCAatatgtaaataataattatgaattcaaagaaaacttgTACATTGGGTTACGTTTAATTGGTGGCTGGTTTTGTTCTTGCGATATTTATCACAGGAAAGAAGGCTGCGGTTTTGACGTGATTAATCTACTCATGATCGGTCTGTGATCAAGCGATTGTTGATGTTTCGGGATGTTCTAGCAATGCAAGACACTTCGTTAGCATTGGAAGGATTTAAAATATATTACTTCTGATTGTATTGAACTGAAACAGTCCTTTCAAAAGTTTTGAGCCAAACTGTGCTCCCATGTTCATCGTGTAAATTCAGAGGTCCACAAGATGAGGCCATTGTGAAAATTGCTGCAACCATTTATATTTGGAGCAATGGCCTGCATATTGTGAAATATGTTTCACTGTTGTAGAAATGTTTAAATTCCTTCATAGTCCTAAAATGCTACTAAAACCATTATGTCATCAATAGTAACTATTATTCGATTTTGGTATTAAGAGCTTATAGAAGCAGTCCATAGAATGTTTGCTTTAAAGAAAGTAAAGTAGGGTTTCAAAATGCTATTACCCCAGTAGGATAGTGCAGTGGAACCTCCATTTAATGAAGGGCCAAGGAACTGGAAAAATATGTCTGCTGTAGCGAGGTTTTGTTATatcaaggttcttttccatcattttgctATTACTGAGGTGAAGAATATCATTTGTTATACTGAGGTATTCATTAAGTAGAAATTCCACTGTATAAACAAGTACCATTACAGCACCGTAGTAATTGTCTGCAGTTTAGTTAGTTGTAATGTTACTGTTGATGTCTGTACCTGTTAGGCTGTAAAGCTAGCCAGCTACAGTAGATAATCATTTTATGTACAATTAAGCAGTGAAAACTCTCACTAGTTTCTGTAGCAAAAAAAGGCTTGTCACTGTCACCACATAGTTGTCACCACATAGATGCAAATGTATCATGAACTTCTACGTATCATCATTAATTAACAATAT

Protein

Uniprot

Uniprot term	Description
Q91VZ6	Stromal membrane-associated protein 1 OS=Mus musculus OX=10090 GN=Smap1 PE=1 SV=1
Q5F413	Stromal membrane-associated protein 2 OS=Gallus gallus OX=9031 GN=SMAP2 PE=2 SV=1
Q8IYB5	Stromal membrane-associated protein 1 OS=Homo sapiens OX=9606 GN=SMAP1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01412	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044732	Domain	SMAP1-like, ArfGAP domain	Interproscan
IPR001164	Domain	Arf GTPase activating protein	Interproscan
IPR038508	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR037278	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR051718	Family	ADP Ribosylation Factor GTPase-Activating	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45705	FI20236P1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12486	SMAP; stromal membrane-associated protein	-	Membrane trafficking	ko04131	deepkoala