Gene detail

Detailed information of ENSSYXP00000044141.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020613696.1, transcription factor AP-2-alpha-like isoform X1 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

ENSSYXT00000046507

CTGCCTTGGTTTCTTTGTAAAGAATTCTGTAATAAGTCAGGACTTTTATGCCACTTACCGCGATTGAATACAACTGAATTGCGGCGACTTTGTTTTAGAAGTCTTCCCACGTATAACTTCCGTTGAAAAACAGCGTATTTACTGTGTTCGACCGCGGTGGTTATGTCATGATTGAGTGATCGACTGATATGACAAACACTTCTCGAAATTCTTCAACCTTTTGATTCCACATGGCGACTTTGATCTTCAATAATCCTCAAGACAAGATACGCTTCAAGAGGGTCTCTTCGGAATTCTGAATGCAACAGCACCTAAGACACCGACAGAATCTTTGTGTGGAAAAAAATCTGGCAGGGATAGTGCTCGGGTTATTTGTGAAACATGAAACTTTCAGGTTTTGCTTCAACATTTGTGTGACTCAAAGTCAAGGCATGAGTGAGAGACACAAGTGTGGCCGCAAAAGTACGCGTCAACCTCATCGCTCGAATCATTTGCAGCAGGATCGAGTCCTTGGACTACACGGCGTAAGCACTGTTAGCGGCACAGGAGTCGTGTCTTCGCCTTCAGCCAATGTAACCAGTGCAGGGTTAGTTTCGTGTGCTCCTCGCCTCTCACACACACCACCTCACGACTTTCGCGAGGTATTGCCCTCACCGATGCAGCCTCAAACACACCAGTACTACGCTCCGCAGTATAACCCATTGCactatcaacaacaacaacagcagagGTTCGACTTCACTCACCCTCTCGAGCCGTTTCAAACACCACATTCGCAGCAATTCGGCAATGGTCCTGCAGGTTTTCACGCGGCATCAGCCGCGGCGCCACACCAGTCCATGGCTGGCCCGACTCATCCACAGCCAGTGTCCCAGCATCAGGCAAGACATCCCACTCGGATGGACGCTATACAACAAGTGCACATGAACCAGTTTGCTGCAGGAGCCGCCATGGAACACGCAAGGCGAATGGAAGAGCGTTGTTATTCAGCCGTGAGAAGGCCTGATATGTTGATCGCTGATATGATGGGACCGGGAAACTTGCAAGATTCACAGAATCATCGTTCAGGAGTATTAAACAGCAAGAATGGAGATACACATAGTCATCACAATTCTCGGGAAAGTCACAAACAAAAGCATGCTGAGCGGGATTCCCGCGAGGAAGCTGACTCAGACAGTCCCGTTCACCCGTCAGATGTGTTTTGTTGTGTACCAGGAAGACTGTCGCTCCTCAGTTCTACGTCAAAATACAAAGTTACTGTGGGAGAGATCCGCAGGCGACTCTCGCACCCCGAGTGTTTGAACGCTTCCCTGCTGGGCGGGGTTCTTAGAAGAGCCAAGTCTAAGAATGGCGGTAAAAGCTTGCGTGACAAGTTAGAAAAGATTGGTTTGTCACTTCCGGCGGGAAGAAGGAAAGCAGCCCAAGTTACGCTACTCACTTCACTAGTGGAAGGAGAAGCAGCTCATTTAGCTGCGGACTTTGATTACGTGTGTGAATCAGAATTTCCCGCCGCGCAGCTGGCGGAGAGACAGTACAGGCAACACGCTGAGCCATCACAACAACAGTCTAGGAAGAATGCCATTATTGCTGCTAAACAATTGACAAAAGAACTTCAAGATGTTCTTGCACAGGACCCCTACCCAAAGACCAGGTTACCCAACAGTAACCTCCCGGACTCTATCTTACGTAGCCTGAACCAGTTTGGTCTCGTTACTCATGGTTTTGGCTCACCGGCGATAAACGCCGCCATGAACGCATTCCAAGCTTACCTAGGAGAACTGCTTAAATTTCACGAAGGAACCGTCACTTCCGGTGGAAACACCGGAAGTAGAAATCAAAATATTGTCAAAAATGGCGAGGCCTGAGTTTAAGATAAATATATTATCCACCACTGTACATTTGATTAGAGCAAAGAGAGGAAATTGAATTTGTACTCATCACTTAATTAGTTAGGGTATTCCACATCGGCTTACAAAGCTACTGTCCTCGGACCATAAACATGTATAGAATATATTATAATCATAGATGAGAGACAAGAGATAAGCCACTTTCTCAACAAAGGAGTGATATCAGCCCGGAAAAAATAGAGTAGGGAGGGTAGGGGGGACTTATTGTTTGGAGCGTATACTTGATTTCGAGCTGTTATCACAATATCATTGCTGTCGagtataaaatatatttatgcCTCAGCAAGGAAATTCATTGAGACGCAATATATAATGAATTTATCTGCCTGTTAATAAACGTAAGCTTTAACTGTTTTGATTAATTGCGAGATATTaaaatgaacaatttagaaaaGAACCGAAACGAAACTAGTACAAAATatatttctgatttttttaattattttgccaGGACAAATACATACGTTGTCAAATGTTTCTTCGTTTTGTTGTGATTTTGCTATGAGTTGTACTCAATGTACGGTTGGCAGTGTCTTCTTAAGAGAATTTAGAAAAATTATATCAACTAAAAATCGTAGACTAAACTCGCAATCCCCGGAGGGAGGCTTCCATATAAAAACAACGGGggtgctcgtcagaaattttgTAAAGAACCACTAAGAACcactattttgttttgtgggtgtgacttgaaatgttttcacccCTTAGAGGtatcagttttaaaacaacacatcTCCTGTAATATTGTTTTCGGTTCGATACCCTAAAAGATACAGCAAAAGCTCGTgctgtggatcttttgaggctgaacagcATAAGAGACACCGAAACCTTTTTTTAAAGTACGACGAGCTCCCCCATTCTCTTTTTAACGGAGTCTTCCATCGGGCTCGCAATAGGCTAACCTTCGTACCGAAAACTGATAGTTACCGTAACAAATGAGTAAACTTCAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P58197	Transcription factor AP-2-alpha OS=Rattus norvegicus OX=10116 GN=Tfap2a PE=1 SV=1
A1A4R9	Transcription factor AP-2-alpha OS=Bos taurus OX=9913 GN=TFAP2A PE=2 SV=1
P05549	Transcription factor AP-2-alpha OS=Homo sapiens OX=9606 GN=TFAP2A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004315 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03299 all species →	TF_AP-2	Transcription factor AP-2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013854 all species →	Domain	Transcription factor AP-2, C-terminal	Interproscan
IPR004979 all species →	Family	Transcription factor AP-2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10812 all species →	TRANSCRIPTION FACTOR AP-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0042127 all species →	Biological Process	regulation of cell population proliferation	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09176	TFAP2A_B; transcription factor AP-2 alpha/beta	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.