Gene detail

Detailed information of ENSSYXP00000046092.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020619603.1, transcription elongation factor A protein 2-like [Orbicella faveolata]
Species abbreviation MLORD · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q29RL9	Transcription elongation factor A protein 1 OS=Bos taurus OX=9913 GN=TCEA1 PE=2 SV=1
P23193	Transcription elongation factor A protein 1 OS=Homo sapiens OX=9606 GN=TCEA1 PE=1 SV=2
P10711	Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006396 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01096 all species →	TFIIS_C	Transcription factor S-II (TFIIS)	Domain	Interproscan
PF07500 all species →	TFIIS_M	Transcription factor S-II (TFIIS), central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001222 all species →	Domain	Zinc finger, TFIIS-type	Interproscan
IPR012164 all species →	Family	DNA-directed RNA polymerase subunit/transcription factor S	Interproscan
IPR003618 all species →	Domain	Transcription elongation factor S-II, central domain	Interproscan
IPR036575 all species →	Homologous_superfamily	Transcription elongation factor S-II, central domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11477 all species →	TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003899 all species →	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000046092.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.