Gene detail

Detailed information of ENSSYXP00000048111.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020622150.1, NACHT, LRR and PYD domains-containing protein 12-like isoform X1 [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

ENSSYXT00000050657

ATGGAAGGGTTGAAAGAGTTCCTAACTCCTTCTCGCTTCAGTTTATTTGGCTATATTGTAGCGGTCCTTTTCCTCTTGACGGGAGTCGTGTTTGTAGGAATCACAAGTAAGTTACGACTCAACGAACGGAGTACTTTCCTTTGCGATTTCGAAGGTACCATACCAGACAAGAATTTTTATAAAGCCGAATGCTTTGAGAAGTACGAGGAACAGTACAATTCTCCTTTGGCATTGTATCTGTTTGTCCTTTTGAGCTTTGTTACCGTGGTAGTGGTGTGCCTCGCTTACTCGTGGTGCTGTGTGAAATCTCGAGTTGACCGGCTTCAAGCCGCCATGGCACCCGATGCGGAAAATCCTCGCCCAAGACCAAGAATAAGAACTCCTCGAGTTTTCGCTAtttattttcttcatttaactACGCGACTAGTCTTAGGGATTGTGTTTACACTGACGCAAAATTTCGTGTTGTATCCAGGTGGTTTTCCAATCGGGTATGCTTGTGTTTTACCAACGGCGAGATCATTCAATACCAGCGCTTCTTCGAAAACAGTCTCTCGCACATCAAACTGCCACAATTCTGTTGCGTCCGAAAAGAACAGCTGCGTGAAAATGGTTTTGATAGTCAACATTATTTTCAACTGTCTCGTGTTCGGGGAAATCATTTATCTTGTAGCACGCTCATTACACAGCAGTAAGTTCACGTTCGATTCAGAATTCTGTTCAAAGTATTTTTTCCACCAAAGCTCAACTCAAGTGAAGCCAACTGGCTTCAGGAAATCCATGAAAAAAGTGATCTTACAAGAAACAGAATTTCTAGACCCACTGATTCACTGTAGCACAGAAGACGAGGAAGGCAACATACATTTAGATGACATCTTTCTGGACGTAATCATTTATTCCGGCAGAGCAAAAGACACATTTTTGAAGGATTGCGAAAGACACCTAATATACGACTCCTACTTAAAGCCTGAAAGCCAAAATGGATCAGTTGCGATAAAAACGCGAGGGGAGTTGTTTCTGTCCAACGAAGACACTCAAAACCCTCGGAAAATTCTCGTCGTTGGTCGCCCGGGGATTGGAAAGTCTTTGCTCTGTCAGAAACTCCTGCGTGATTGGAGTAAAGGGGACCTTTTCCATGACAACAGCAAAAGTTTTCATTACgcgtttttgtttcagtttcgtTCGCTTTATTCGGAAACATCAGGAAGGATTTCCCTTCGGCAGTTGTTGAACCGCACAACATATTCAGCCGGGCACAGGGACGATGACGTTTTACAAGAATTGTTGGATCATCCTGAGAAAATACTTCTTGTATTTGATGGCTTAGACGAATTTAAGGATCACGATAGCTGCACGACGAACGAGGCGGCACGATTCGGAAATAGCCCAACCGAGGAAATGCCATTATCAGCACTTTACGTGAAACTACTGCAGGGAAAGCTCCTTCCTGGAGCAACGCTATTGACAAGTTGTAGGCCGACTGTGCTAGGAAGTGTTGAGGTCCCACTGTTTGACAGGACTGTGGAAATAATGGGCTTCACAGAAAAGAAAGTTCATACCTTTGTGAACAACTACTGTGAAAAAGACAGCGCGATAGCAACAAGAATCTGGGAGCACATCTACAGCAATTTAAACCTGTTGTCTTTATGCTATATTCCTGTGAATTGTCGCATATTGTGTTTCTTTTTAAAGGAGTTGATCAAACTTTGTGCCCTGAGATCAGAAATCGTCACCTTACCAACAAGGCTTACAGAAGTCTACCAAGGAGCTTTGAGATTGTTCATCTTCAAGCATCACCCGGAATTTCGCGATAAACCATTTCGAGGAAATGAACGCTTTTCAGATTCAGTTGAACAGACTTTGACAGAGCTCGGGTCGTTAGCAAGAAAAGGCATAGCCGAAGGGCGACTGATATTCGACTCCGAAGAAGTGTCGGGAATGATACATTGTGGTTTGCTGAATCAATTGCCTGACAGCAGGCTGTCTCCGGTGGAGTTCAAACAACGTTTTTGCTTCATTCATTTAACTTTACAGGAGTTTCTCGCCGCGAGAGAGATTGCTAAGATGGCTCCCGATGACCTCCAGGAATTTATTACGTCTAACGCGGAAGATCCAAAGTGGTATTTGGTTATTCAATTCGTTGCTGGGTTACTTCATGGCCAGCAAAATGACGCAGTCAGCAGCTTTTTAAAGTGCCTTCACGACTCTTTGCTGTCGAATCCACCGAATAGAAAGATGGCTTTACTCATGATGAAGTGTTTGTACGAGTACAATGATGATGCTACAGTGAAAAGCGCAGCTTCTCAGTTACAGCAGAATAGATCTTTTCGCAATTCTTTTGAGTTGTGGACTTGCCAAATAACACCTGTTGACTGTACAGCAATTGTGTACTTCTTAAGAAACATTGAGCAGGTGAATTACTCACTTTACCTGAGTATTAATTCTCTAGGAGAAGGGGGATGTAAAGAATTGGCCAAGTTGCTAGTTGAGGGAGGCCCAGTTAAATTACTCCTAAGAAAGAACAACATTACTGACCAGGGTTTGATTTCATTGATAAGAGCTACGAGTGTGGACAAGTGTAAACTCCAGAAGTTGAACCTCAGTTTGAACGACTTAATCACTCCAGATGCATTAGTCCTTCTTTGCGaatcactaaaaactaaaagttGTAAGCTCACTCGGTTACAACTTGGCGGACTGCAAATAACTGAACACGTCTTATCTCAATTGTGTGAATCATTGGAAAACGAAAACTGCAAAATCACCAGCCTGAGGTTTAACGATGAGGACCTTTGGACCGACGCGGTTTTGTTGAAGTTCTGTTCAGCTCTCAAACACCAAAATTGCCAGGTGAGCTCGTTGAGAATTGAGTGTCAGAAAATCACCAACCAGGGAGTTGAACACTTCTGCCAAACACTTGAGAGCGAACATTGCAAACTCACGAAGCTGGAGCTGATCAGCAATCGAATAACCGCTGTGGTGGTACCTTTCATTCGCAGATCATTAAGTCACCCGAATTGTAAACTCTGTAAATTAAACATTATATCTTGGAACATGAATCAACAAGTAAAGAGAGACCTGGATGAGGCACTCCAAGCTGCCTGGCTCCAACGCAACCCTCATTCCACAATATACAACTCACAACTTCACTTTGCCGATAAAAACATAAATATAATGGCAGTTACCAAGTTCGTTCTTAACTTCATTTACTTCGATCAAGAGGCCTTTTTCCCCTCCCCTCTCGGATATAATGCCCACCTTGCTTGTAACCTTGTCAACTCTTCTTATACAGTTCAGTTGTATATGTTGTGCTATGCAAACGCCGTTTGCATAGTACAACATATACAACTGAACTGTGAAACTGTGAAATTGGCAATGTTTTCGGTTATTAGCAGacgaaatgacaaataa

Transcript

ENSSYXT00000050657

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K3Z0	Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
G1T469	Nucleotide-binding oligomerization domain-containing protein 2 OS=Oryctolagus cuniculus OX=9986 GN=NOD2 PE=1 SV=2
C6FG12	Protein NLRC5 OS=Ictalurus punctatus OX=7998 GN=nlrc5 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000076 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729 all species →	NACHT	NACHT domain	Domain	Interproscan
PF13516 all species →	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR038359 all species →	Homologous_superfamily	Connexin, N-terminal domain superfamily	Interproscan
IPR007111 all species →	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050637 all species →	Family	NLRP family, innate immunity and inflammation regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45690 all species →	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0050727 all species →	Biological Process	regulation of inflammatory response	Interproscan
GO:0050729 all species →	Biological Process	positive regulation of inflammatory response	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000048111.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.