Gene detail

Detailed information of ENSSYXP00000048122.1 in Micromussa lordhowensis

Genomic Location: not available for this species
NR annotation: XP_020630618.1, elongin-C-like [Orbicella faveolata]
Species Micromussa lordhowensis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KII4	Elongin-C OS=Bos taurus OX=9913 GN=ELOC PE=1 SV=1
Q15369	Elongin-C OS=Homo sapiens OX=9606 GN=ELOC PE=1 SV=1
P83940	Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008238 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03931 all species →	Skp1_POZ	Skp1 family, tetramerisation domain	Domain	Interproscan
PF00075 all species →	RNase_H	RNase H	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039948 all species →	Family	Elongin-C	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR001232 all species →	Family	S-phase kinase-associated protein 1-like	Interproscan
IPR016073 all species →	Domain	SKP1 component, POZ domain	Interproscan
IPR002156 all species →	Domain	Ribonuclease H domain	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20648 all species →	ELONGIN-C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0030674 all species →	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0070449 all species →	Cellular Component	elongin complex	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004523 all species →	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSYXP00000048122.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.