Gene detail

Detailed information of ENSTHXP00000015134.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Sequence

CDS

Transcript

ENSTHXT00000022407

GCTAGCTTGAATCGAGGATGATTCGGTAAACTCTAAAGCCAATAGGACTGCATTACCGTGTTTATGAACAGTATGGATGGCATGGCCAAAGAGAAGGAGTGTTTTGGTGAGGATACTTCTGTGAGTTTTTGGACAACTCCGGCGGACGATGGTTTCCGGTTCTCGAATCTTTCATCAAAGCACATGTCCATACTCGCGGAAAGCGGACCTTTCGTTGCCATAGTGTTGTCTTATTGGGATAACGTCTTAGGACCTAGATTACAGCATGTGTGGAGGGGAGCTGGGGATGCCGAATCCCAGGAATCAAGTGTTCGATACGTAGTAGGTCGAACCCTCCATGGGGAACTTTTGCGAGATGCCCCTGAAAACCTGGTAGACACTAAATTATTTGTCCTGAAAGATCACAACATTGTGTGCCATTCTTTTATCTTCTCTGGTCGTGATAAGTCTGGTATCAATATTTCTGGCCTTTCGCTCGTCATTCCATTCTCAGAATTCAAAAGTTACTTGCCATTTGTAGAGTTGGTGGAAGAACGAGTCAGGATTCTTATTGCCAAGCTGAGAGTCTTGCAAGCTAAGGATTTGACGTCTGCCGTGTCTACATTTGGTACTTACCTACCTTGCTTTATTCAGATGATAACAAGTCTTCGAACAGCTGGCATTCCTGATTCCTTTCCATTAAGTGAGACTGCCTTTGGCCCAGGACAAGGAAAGACTTTTGATGATCACTTCTTGATGAGAGTAATAACATCTCATCTACAGACATTTGGAAGTACTCTAGTTGTTGGAAAAGCCTTGGATAAAGTCAACTTGATGGTTAATACCTTGGCATTATTGCTGTCTCCTGAGGAGCGTCAGCGATCTCGCTATGCAGTGGAGACATTATCTAGTGACTCTAATTTGTATGATTCAGATCTGTTTGTGCAGGGCTTGTTAAAGCAGAGTTCCAAGGAGCCATTCAGCCTTCCAGTAAAGGGCATCATTACCAGCAGTCTTCCAAGCACTCTGGTTGACTTGGATACTGGTGAAGTAAAACAGACACACCCTTTTAATGAGCACGTGGTCATTAGAAAAGAGTTTATTGACATCGAGTTAGCGCTGCTGTTAGAAGAGGCAGAAGATGCCCCAGTGTTCCCCGCGCTGGGCTTGTTTCACAGCTCTGAAGAAGTCGGTATCCTGGTGCAAACATTTATGCATGATCTCCATCTTCTTCCATACGTTTGTGGCGTCCGTGAGGGATTCATCGATAATTTTTTGCGTCTTCTTGACAGAAAAGCTCTGGCGCTCATCAAATACGTGGAAGCTAAATCGTCATTTGGTACAGTTCCACTGGACCACACTGCTAAGCGGCAGTTGCGTCAGGACTTGCAGCTCGCCACAGAGGCTGACTACTCCATTGTGTTAACGCGTGCGGAGAAGTTACATCCAGGAATTTACACGTTTCTGAATGGAGATCCTCGTCAAAACGCGGCTCGGGTCCAGGCCAATTTAGAGTGGCTTTGAACTAAATTAATAATATTTTATCGAGGGCATCACATCAACAGTTTTTCACTGACAAAATTGTGGCCATCTATGAACTATTTTTAATATCTAATATATAAGATTGTAATTCTGTATTTTTGTATATGCTTGTAATTATATTTCAGGCCACAAATTTATGAGCTTCAAAGTGTGTTACCCTCTCCCATTAAATTCATTACATTAACTAACTAACGAACGGAGAGGAACGTGAATAAAATTGAGAAGGCCTCACAAAGTGGTCATAGTACACGTGAGGGGATAATAAAAGCCTTTCTGTGGGTCAAGCCGCTGTGACTTGTCCCCTCAGTATGAACCGAGGAGACAAATTGAAGGGACCAAATTTTATTCCCTGCGACTGGATGTTTGGTATTAAAGTTATAATTCATGGTCAGTAGACCTcaaaattgattaaaatatcCGTGAGTGAAAACCAAGTGTGGGCCCTCAGTGGAAAGCTTAAGCAATTGAGCAAATCCCTGTTATTTTCATGTGATGCGTTTGTCGTTCAACATTTTTCAACAGGAAAGTTTgggatttttttcaatttggaTCCTCGGCTCTCTTGTGGGTGACAGGTTCATGGGGCGTCAATGTCAACATAAGCACTTCAAGGTTTACAGAGACCCCTGCCTCGTCCCCCAGGTGTTCCTTCTTATTATATGATGGTgcgcgtggcgttgtgggaAAAATGCACTGCAGCCATTGAACGttttgcatccttcccacgacgccccgcgctccctgtttgcccgcACTAAACCagcgcctggggacgaggcagaaTACCCC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15019 all species →	C9orf72-like	C9orf72-like protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027819 all species →	Family	Guanine nucleotide exchange factor C9orf72	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31855 all species →	GUANINE NUCLEOTIDE EXCHANGE C9ORF72	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0005776 all species →	Cellular Component	autophagosome	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0006914 all species →	Biological Process	autophagy	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23609	C9ORF72; guanine nucleotide exchange protein C9orf72	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.