Gene detail

Detailed information of ENSTHXP00000016621.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Sequence

CDS

Transcript

ENSTHXT00000024557

CTTTCAACAGTTCCAGTAAGCCATTTGCACTCCTTGAGTGCCTATTTTTCCTTAAATACTGCTCTAACTTGGGATTCCACATGAGCAGAAAAATATTTGGTATTATTCTTGTAAGCAAGGCACTCCAATGTGGTCCTGAGCAGAGTGAAAATCTTGAGCTGGATTTAAGCATTTGTCAGAGATGAGCCCACTGCAAATGTATACCTCAtctaacaacaaaataaaattaattttaagtgTGTGTTCTCAGTCTGCAGCCATGCATTCACTCATTCTGTGCATCATGCTATTCACAGTGGATGGAACGCTCTAGTGATTGCCCTAGTTGTcgaaaaaaagttgaaagaatCAGCAAAAATCACATAGTGAACAACCTTGTAGAAGCTTTCCTAAAAGAGCATCCAGAAAGACGGCGATCAGAAGACGAACTTAGAGAAATGGattctaaaaacaaaattacagaGGATATGcTCAGGCCAAAGCGTAATAGAAGGTCAGTTGATCGTTTATTTGGATTATCATCGTTTGATGACgaggaagatgatgatgatgatgaggaggaggaggaggatgaagATGAGGACACTGATAGCTCTGATGAGGAGGCTTTGATAAGTCCTATATTTATACCACCTGCTTCTTTTGGGGGCCTCTTTGGGTTCTCTTTTTCAAGGCCTGTCCCTACCAGCTGTAGGCTTTGTCCTGGATATATCGCACCCACTGTTCCTTCTGGTGCATGTGCAGCCAGTACTAGTGAAGGCACATCAAGCAGTGTAACACCTCCAGACTACTCATGTACTCCAGATCAAACCCACATCTTATGCCAGTGCTGTTTACAACCAATGCCCCAGAACTGGCCTGACTCAATGGCAGATACTATCCCTGCACAGAAATATTTCAAATTGAGTAAAAACAATCTTCTATCGTTAATCAACAACAACCCATATGAATCCAAAATACTTAAGGATTATCTAACAGAGCAAAGTCTCAATAAAGAAGATCTGTTGCAAAGATGTCTTCAAAAGCTGGACTCTGGGGATTACACCACTGTTGATTCAGCATCTCACAACCTTACTTCCTCGACGGTGCTTTGCTACAGATGTGGATTGCGGAATTTCCAGGAACTTGCGTATCAGTACCGTCAAGACATCCCAAGGGATCAGTTACCAGATTCTGTGCATTCTCGGGCTGATTGCTATTGGGGGAAAAACTGCCGGACACAAAGGACAAAGCCTCTTCATGCTAGTCGCTTCAACCACATTTGTGAGCAGACACGATTTACATAGCTGCCACTACCTCAGAGCTGTTGGTGTGATACGACCACAGTCATAATAGTAATAGTGGCCTTTATGTTAGAGTATCAACCCACTGATGCTCTCTGAGCCCAAACTTCCCCTGAGCCCTTGTTACATGAGCATTAGAAGAGGACCAGGAGAAGCAAGACTAGATAGTGTGACATGTGACAATCCACATCATGCATCTACTACTTTTGAAATTCATACTAAGTCTGTGTAATGGTACTTGTACTCATCCTTTTATCTGGGAGTGTTATTATGAGCAGCAGAATTTATTAAGTTGCCAGGCTTTCCCTTCCCATTTGCTCAATATCTCGTTGAATCAAATACCATTTCTAACTTCATTACTGTTTAGCTAACTTAATCACTCTCAGGGTGCGGTgttgtagtggttagcacattggacttcagatctaaaggtcggtggttcaaaGCCCCGCCCCTGCCGTTGTGTTGTTTCcctggacaagaaactttacaccacattgtctctctccacccaggtgtacaaaGTGGGTGCCAGTGACATACTGCGGAAGgaaaccctgcgatggactagcattctatccagggaggagtagcaatactctcagttgcttcttgctacagaaaccggaCTAAGCTCTGGCTTTGTAGGCCTCCTTGGGTcatgtgcaactttaccttaaAGGCTAACTTGATCAATACTTTTTTGAACATTTTGGGTTCTCTTTGTTCTCCTGGTAATGCCTTGGTCAAATGTATTCAGCATCCTCCAGCATTGTTAGATACAACATTCTATGGATATTTAATGGCAGTCGAACCTAGTTCAACACCATTCAGCAGCCTGAACAGAATAATTTCACATTATTCAACAGGCTGCACAGGAACGTTTAAGACGaattccgctcaacattcgagcaataagtgcaaaaattatttactaaaaaactattcgtagcacggtaacattttgaatactatttgaaacatctcactttaattcgcttc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17979 all species →	zf-CRD	Cysteine rich domain with multizinc binding regions	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052256 all species →	Family	E3 ubiquitin-protein ligase CHFR	Interproscan
IPR040909 all species →	Domain	E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16079 all species →	UBIQUITIN LIGASE PROTEIN CHFR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0007093 all species →	Biological Process	mitotic cell cycle checkpoint signaling	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTHXP00000016621.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.