Gene detail

Detailed information of ENSTHXP00000021186.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation SRADI · all data for this species · gene families

Sequence

CDS

ENSTHXT00000031020

ATGCCAGCTGTAACCCTTGACGAGGCAAACGTGACGGAGGGCAGTGGAAAATTACAATGCCCTCATCTGCGAGAGAAAAGCGAGGAAAACCTGCAAATTgaggaaaagaaggagaaagaaaTCAAAGAACAGGCTACTCTTTTGAACGAGACAGAAGCTAAAGATGGCATTAATCAGACGGGGACAGTCAATCTACATTTTTTAATTCCTGGAACAAATGAACCAGTTTCAGCTATGttttcctTTCAAGACAATGTACAAGATCTCCGACAAGTTGTTCTTGATCGACCAGAGAGTTGTTACCGGACTTGCTTCTCACTTCAAATAGATGGTGTGAGACTGGATGATTTTGCCGAACTACATATGGTTGAAGGGTTGAGGGATGGGGCTACTGTAAAAGTCGTTGAAGAGCCATATTCAGTCAGAGAAGCCCGTATCCACCTGAGACGAATTAAAGATCTTCTAAGTACAAACTTCCATGTTAATGCATATGCTGCTGTGGATCATCTGTCCCTATCCTTCCTGTCTGCAGTGGCTGGGATTGATGTAGAAGAGGAAGCTGTACGGGCCAAGGGGCAGAGTGCTGGAACAGTTTCCACAGAGGAATGCCTCCCTCCTGCTCAAGTGTTTGCATCAGAAGAAATGCAGACTATTTTAGAGCCACTCTTCCCAGCAAATGCAGAACCAAAGatTCCTCAGTGTGTAAAGGACCTGTCTCCCAGTGCATGGAACCCTCCTCCAGGTGTACGACGTCTTGCAGGTTTGAACATTGACTTTGTTGAGCTAACACACGATGGTGTTTTCAACCCTCAACCTCACAGTGAACCATGTCGTTCCCATACACTTGTAGGACTGCTAAACCAGGTGAGGTTCAGTGTCATTTATGACAAGAAAGGTAACTTAAAtttgaagAGGCATCCCCTTGAAGTGATCCCTACACCTTATCAAGTGTTTCCATGGGCCGTCCCTCAGACAGAACACACAAGTGACACCCTAAGGGCAGAAGATGGTAGGTACAGTGTACATCTCCGTGACTGGAATGAAGAACTGCAGTCTGCAAGAGAATTACCAAAGGATACAATGCCACAGAGAATACTTAGAGACAGAGCAATTTTTAAGATCACAAGTGATTTTGTATCAGCTGCAACCAGGGGAGCTATAGCTGTTGTGGATGGAAATGTGATGGCCATTAACCCTGGAGAGGATGAAAAGAAGAGAATGTTCATCTGGAACAATATTTTCTTCAGCTTTGCATTTGACAGTCGAGATCACTTCCAAGAATTAGGAGGTAGTAGCATAAAATTTCCAAACACTTTTTTCTCGGGTTACAGAGTCATTGCTCAGTCAATTATCCCAGGAATCCTTCAGCGTGAGCAGGAGCAGTCGGTTGTTTATGGTTCTGTTGATTCTGGGAAAAGCATTTCAAGTCACGATAAATTCCTAGAGCTGCTCAACAAGGCAGGCAAATCTATCAGAATAAGACCACACAAGGTTCTTAATTCTAGTGATGAAGAAATTGAGCTTTGTTCTTCAGTGGAATGCAAGggaaTCATCGGAGCCGATGGAAGGCATTACATTCTTGATCTCTTCAGAACTTTTCCACCCGATGCCAATTTTCTTGGAGAAAAGAAGCAAGCGTCAGATAATGCTGATGAGACGGAGTCCAAGGCAGTATTTCCTCTGCCTTATAAACACAAGCTTTGTTGCTTGAGACCTGAACTGATTGAAGGATTCATAGCATTTCGCTATGTGCTTTTCCTGAAGCTGGTTGCCATGCACGTGTCAGCTGCCAAGCAAAAGGAAATGCAGAACAATACTGATGAGAAGCCTGTAGGTGAAACAAATGGTGAGCAGTCTGAATGTCCATACAAAAACAGACTTAGCAGTGATGATGAAGATAGTAAAGAGAATGGCAAGTTGGAAGAAGCTGTAAAAGAAGCTGAAGAAAGTCAGGAGAGTGTGAAAACATCATCTGAAAGTACCGCAGaTGCCAGTAACATTTCCACAGATGCAATCAAATCAGCAGCCAAAGCTGTCGGCTCAATCAATGATGCAGAGTTTGATGTCAGATTTAATCCTGATATTTATGCTCCTGGTATAAAGCATGCATCTTGTGAGGAAGCTATGAAATGTGACAAGTTACTTGTTCAAGATGCATCGGACTTTTTGGTCGAAACTGTGATCATAAAAATGGTGGAGGATTTTATCAGTTTATCGCAGACACCACTGGATGGCTCGCAGTTAACAGACGTCATGCACAACAGggGTATCAACATGAGATACTTGGGGAAAGTGGCCTCCATTTTGTCTTTGAGGGCAGATCTAGAACATGTATATATTATCGTGCCATGTAAACTGATCGCTCTCCTTTTGCACTTTTTTTCAGCAACTTTGAGGACACTTTCAGTTGCAATTAGTCACTTTTTAAATTGCTTCCTGGTAAGTTGTCAGTGTTCCTCTACTTTGGCTTGGGCAACCCTCACTCCAGAAGACTTGTGGAAATTAATTAATGAAGAACACTTAAGATTTAAACTTTGTAAGCTGCACATGATTCTCTTATTGCTTGTTGTATTTAAAGGTGTCCAGATCTTGTTGCGGGAGTATGACTTCGAGAGCAGGAAGCACCCAACATTCACAGAGGATGACATCATGAATCTGTTTCCAATAGTGAAACATACCAACCCCAAAGCATATGATGCATCAGCCATGTTTGAGGCTGCTCAAGGCCGGCTTCAAGGAGGACTGCTTGGGGAAGCTCATGAACTGATGGTAGAAGCTCTTAATCTTTTCCATCAAGTGTATGGACCATTGCACGCTGACATTGCTACATGCTACAGGGCAATTGCAAGACTCCACTATTTGGCAGAAGATGCCGTGCAGGCTGTCAGCTATCAAAAGAAGGCTGTGATTGTTTGTGAGAGAGTTTTTGGTGTGGATCACCCAGACACTATCATTGCTTATGTTCACCTTGCCCTATACTGTCACAATGCAGGCCTGGCATCAGTGGCTCTAAAGCTGATGTACCGTGCAAGATATTTAGCTCTGGTGGTGTATGGTGAGGGACACCCTGATATGGCCACCTTTGATAGCAACATTGGTCTAATCCTGCATGGCCAGAGGGAGTTCAAGATATCAGAAAGGTTTCTAGAGAAAGCCTTGGATGTGCAGCTAAAGTACCATGGGCCAGAGAGCATCCATACTTTTGGTGAAACTGACAGTCGTACAAAGGAAAGCTCAGAATACCTCAAGTATTGCACTCAACAAGCTGTCCTTATACAGAAAAAGctcaATGAAATTGCTGGGAAAGGAACATTCAAAGTTTTGTGCATTTCATTAGTTACTGAATTGCCTCCTGATGAAGAAAACATCTCTCAGCTGATGGGTTACTTAACTGGACTTCAAGGAATGCACTCCACCAGCACATCGCCCATAAAGTAA

Transcript

ENSTHXT00000031020

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13374 all species →	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13236 all species →	CLU	Clustered mitochondria	Domain	Interproscan
PF15044 all species →	CLU_N	Mitochondrial function, CLU-N-term	Family	Interproscan
PF12807 all species →	eIF3_p135	Translation initiation factor eIF3 subunit 135	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR025697 all species →	Domain	CLU domain	Interproscan
IPR033646 all species →	Domain	CLU central domain	Interproscan
IPR028275 all species →	Domain	Clustered mitochondria protein, N-terminal	Interproscan
IPR027523 all species →	Family	CLU domain containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12601 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006996 all species →	Biological Process	organelle organization	Interproscan
GO:0048312 all species →	Biological Process	intracellular distribution of mitochondria	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03255	TIF31, CLU1; protein TIF31	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.