Gene detail

Detailed information of ENSTHXP00000021527.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Sequence

CDS

ENSTHXT00000031474

ATGTACAACAACATTGGCTTGCAAACAGCTCGTGGCTCGGGCACAAATGGCTACGTTCAGAGGAACTTGTCGCTGCTTCGTAGCAGAAAGGAAAAAGTTGATTATCTTCGACAGGAAGATGTTGATAAACTTGAACAAATGAACACGAAAAAACCGAACCAGGAGATCTTGGAGCACGAGAGAAAACGGCAGATTGAGCTCAAGTGTATGGAGCTGCAGGATATGATGGAAGAACAGGGATATAATGATAATGAAATTCTTACCAAAGTGGAGGAATTACGACGTATCCTTTCTGAGAAAGAGGGCATCATATCAAAAGACAAGAAAGAAGGAAGATCCAATTTGAAGGAGGATTCaccagaaaagaagaagaaaaggaaacacaCTCCTGTGTCTGAGTCCTCAGGTGAAGGGAGTAAGTCTGACAGACACCTAGTAATGCTAATTTATCGTTTTTTCTGCAGTCGATCAGAAAGTGAAAGTCCCGACAGACGCAAGAAGAGAAACCATCAGAAAGACGAAAGAGATCAgagaaatagaaaagaaagtcGCAGCCTCTCAAGAGGTGATGACAGCTTGAAAAGACGCCGCAGGGAAACGTCCCCTTCTTCAGATGGTTTATCCCCCCAGAAAACAAAATCTCAACGCCAGGTCACGTCAGGTGGAAGAAGAGAACAAGTCAGGCGTGATGAAGAACAGTTTCAAAAAAATGCATCGAGGGAAGAACGCAGTAATCGTACGCATTATGTTGGGTTACCTGTGGCACGTTATGACTCACCTGATGATGAAGCAAGGGGCAGGCAATCACGTGCCCGTGGAATGCATGAGAAGCGCTCTTCAGATAATGATGCTTTTGAAAGGCGCCAACGGCGTGCTCATCATTCGAGCTCTCCAGAAAAATCCCCTGAtgtgagaaagaaagaaaaacaaaggaataCCCAAAGTCCATCTGAAGAAAAGCGCCCTGCGCGCCAAAAACAACTTGTTCAAGAAAGGCCTGAAAGAAGGCGTAGGAGATCTAGTTCAAGCCCCGAGCAACCAAGAATTACACCCAGAAGAAGGGATTCGCGCGAGAGAGAAGAAAACAGGCAGTCAGAACAAAGAGTGAATGCCGATAAGCGCGAGGATGTTCGTATGCACCGTGCGTCAACTCCTGAAGATTACAACCGTAAACGCAGTTCTTCCAGGGAAAAGACTAGGATGCAGAGGCAGCGTTCACCTTCAGCTGAGGATAGGCTCCGCATGGAAAGTACACGAAGAAACCGCAGGCAGCAGCCAGCTGAAAGTCCCACTAGGGAGGTCAGAAGAGCTAGAAATGCAGTCAGAGAAGTAAGCCCCATTAGAGAAAGAAGGTCAAAGGTGAGATCACCTAGCAAAACACCTTCCCCGAAACCGACTGCAAAAAAGGCAGAAGAGTCAAGAGAAAACCAAAGAGAAGCAAAGCAAGTGGCTACAGCTAAGAAAAAGGCTGAATCGAAACCATCTTCCAGTTCAGAGGAAAGCACTTCAAGTAGTTCATCTGAGTCTGATTCCGAGGACGAATCATCCGATGGCAGCGCCGATAGAAGAGCACCTTCCCCCTCTCCTCATAAAACTCGACAACAGTCCCCATCAGACAATAGTCCAAGTCCTTCTCCTGTCAAGTCACAGAAGCGGTCTTCAGATAATACAGCAGCTTCGAGGCAGCAAAGGCCTGGTAGAAGCCCAAGTCCACCTCCTGTACGTAGGAGATCACCTCCAAGCCCTGTTCGCGCTCGGCAGACAAATAGATCTGGAAGAGGAGCTAAGAGAGATAGGTCACGAAGCCCCGAGCCTCAACAGCGTCAACCATCCAAAAGCGTTTCACCCCAAAGACAGAACAGAATGCTATCTTCATCTCCTCCCCGACAACAGTCTTCAAGAAATTCCAATCAGCGCCGGCAAAGAAGTTACAGTAGAAGTCCACGCCGATCtccacccaccccaccccataGACGTCAACCTTCTAGAAGCATTACCCCCCCGAGAAACCAAAGAAGCCCTAGCCCTGCTCGGAAACGTCGATCAAGAAGTCCAGTTTCTCCCCGAAGCTCAAACTATCAGCGAAGAAGAAGCCCTTTAAGAAGTCAAAGTCATAGCCGCAGTCGTTCTCCTCCTAGGCAACCGCGTAGGCGTCAATCGTCTCGTAGCATGTCACCACAGAGAAACAGAAGAAGCCCAAATTCTCCTGTCAGGAGGAGCCGATCGAGAAGTCCTCTTCGTGCTCGAGGCTCAAATCAGCAAAAGGGCAGAAGTCCAGTGAGGAGACAGAGAGCCAGCCCTAGGCGCTCTCCTCCCCAACCATCTCGTAGACGACAGCCGCCAAGAACCCCGTCTCCTCCAAGGAATCGGCCAACAGCAAGTCGATCACCTAGACGAGACAGCCCCGTTCAGAGACGTAACAGAACTCCGAGTGCATCGCCTGACCGCAGAAGGAACAAAGTAGGAGAGCGTGTGCCATCTCCCGTTCAGAGAAAAAGCCAATCCTCGGCCGCCCAACAGAAGACGCGAGTTCAGAAGGCAAGTAAAGCAAGAAGCACGGAAAACCAATCCCGCAAGAAGAGAAGCAGCAAAAGTGGAAGCAGTTCAGAGGATGAGAGCAGCGACAGTGAAAGTAGCAGCGATAGTAGCAGCGAATCCAGCAGTAGCAGCAACGAGGAGGAGTCTGGCTCAGGCAGCAGCAGCAGCTCTGATAGCGACAGACCAAGGAGATAA

Transcript

ENSTHXT00000031474

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08312 all species →	cwf21	cwf21 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013170 all species →	Domain	mRNA splicing factor Cwf21 domain	Interproscan
IPR052109 all species →	Family	Serine/Arginine Repetitive Matrix Domain-Containing Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34755 all species →	SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13172	SRRM2, SRM300; serine/arginine repetitive matrix protein 2	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.