Gene detail

Detailed information of ENSTHXP00000027355.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Sequence

CDS

ENSTHXT00000040791

ATGGGTAAAAAAACCACGGTGGAGCAAGATGAAAAGAGTCAGTCAGCCATGGCTGAGCATTCAAGCTTGTGGAATAGATTCTTGCTGTTTATGATTTCACCAACTGATCCATCAAATCTTGCTGTATTAAGAATTATATTTGGATTCCTTATGATGCTTGACATTCCTCAAGAACGCAGCATGTTGTTCATCGCTCATCACTTTGGTTCAGAATCTTGCCACTTCCCACTGTTTGACTTTATCCAGCCACTCCCTATCGACTGGATGCATGTTGTTTACCTGGTGATGTTTCTTGGAGCTTGTGGAATTTTTCTTGGATATATGTTTCGTCTGAGCTGTTTTTCATTCATGATAACTTATTGGTACATTTTTCTGTTGGAGAAGGCACGCTGGAATAACCATTCATATCTGTATGGATTGATCTCATTTATGCTTCTCTTGAGTGATGCCAATCGTTACTGGTCTTTGGATGGATATTTTAACCCAGAAATAAAGAATTCTCATGTTCCAAAGTGGAACTACGTTCTGCTGCGCTTTCAGGTGTTTCTTGTGTACTTCTACGCTGGCCTGAAAAAGCTCGACTTAGACTGGATGAGAGGATATTCCATGACCGGACTTTCTCGTGAATGGGTTTTTGATCCATTCCGCATTTTCCTTGATGACCAAACAATAGACCTGTTTCTTGTTCATATTGGTGGATTGGTGTTTGATCTGTCAGAGGGCTTTCTTCTCATTTTTGACAAGACCCGGCCCATTGGAATATTCTTCGGTGCAATGTTCCATGGTATGAATTCTCAGATGTTTAACATTGGAATGTTTTCATACACTATGCTGGCAACGCTGCCCCTGTTCTGCGCTTACAACTGGCCTAAGAAGCTGCTTTCTCGCCTCCCTAACTTCACGGCTAAGATACTACCATCACCGGAAGATCCTCAAACCAGCAAACACTGTGTGTACCCAGAAATTGCCAAGGGGCCAGGCAGGGAAGAACAGAgtgataaaaagaaaatgtcaaAGAGATGTCAAGCACCCGCTGCCAAGCACAAGGCTTCAGTGTTTATGGTTCTTATTTACATAGTAATTCAGCTGTTCCTCCCATATTCACACTTTGTTACAAAGGGCTATAATGCTTGGACCCAGGGTCTATATGGCTACTCTTGGGACATGATGGTGCATTCCTGGAGTACACAACATGTCAGGGTCAAAGTAGTGGACCAGGTGTCAGGGGAGGTCACTTATATAAGGCCCTCGGCGTGGCTAAGAGAGCAGCGGCAGTCCCGATGGAATTCCCATCCAGATATGATCAAACAGTACACGGCCTGCATGGCAGAAAAGCTGAAGGCCTTCGAAGAACTTAACATCACGGAGCCCGCGATTTATCTGGACGTGTGGCGCTCAATGAACAAACGCTTCCAACAGCGCATGGTTGATCCAAATGTCGACATGGTCAAGGCCCCATGGTCTCCATGGCGACAGACGCCTTGGATACAGCCGTTACTAACAGAGCTGTCGCCGTGGCGGGAGAAGTTGATTCAGATTAGAAGGGAGTTGAAGGAGAAGTCTAACTTCAGTGAGATCACGTTTGTTGCCGATTTTCCAGGGctttttttggaaaactttgTGGCTGAAGAGTTGAACACCTCCTTGACTTTGTTACATGGGCAAGTCAAGGTGGAGTTTAACAATACAAATCACACTTTAGAAGTTGGTGAAGAAATCTCTGTCCCGTCAAACGACACGCACTTGGTGTACACGGTATCAGACACTCCTTCTTGCTGGATGTACATCTTCATGAACACTACAGAGTGGAACAACGAAACCATCAGGAACTGGATTCTGCACCCGGAAACTTCCCCGGGCAAGCAGAAAAAAATGTCTTGGGAAAACACAACACTcttggaaaagtttaaaatatttGCTACGGACAAATACTACATTTTCCGCCAAAGTTTTATGAACACTTACTACGCTCTGGCCCATTTGACTCTTGGGATTGAGCCACCGATGGAAAGTGACGAAGAGGATGACGGCAGTTCTACCGAGCAGGAGACTGGAGGCGAAACAGACCAGGGGATGAGTGATGGAGATACTTCAACACATGATGACGACGCAGGTCACGTGGATAGAGAAGCGGGGACACGTGATCAGGGAACTGGCCAGGAGGATAACACGCAAGGAAAAGAACACGATAAACAGGAACTGTAA

Transcript

ENSTHXT00000040791

CCTTTATCAACCAATCGCTAAGATCTACGAGAGTAGACAAGACAGCTGCTATTAGCTTCGTTTTCATTGAAGAAACAGGGCAGATTTTGTCAGCATTATTCTTTGTATTTGATCGCTTGTAGCCCGCGTGGAATAAAACCGCTCCGAAGACCTTGAGGATGGGTAAAAAAACCACGGTGGAGCAAGATGAAAAGAGTCAGTCAGCCATGGCTGAGCATTCAAGCTTGTGGAATAGATTCTTGCTGTTTATGATTTCACCAACTGATCCATCAAATCTTGCTGTATTAAGAATTATATTTGGATTCCTTATGATGCTTGACATTCCTCAAGAACGCAGCATGTTGTTCATCGCTCATCACTTTGGTTCAGAATCTTGCCACTTCCCACTGTTTGACTTTATCCAGCCACTCCCTATCGACTGGATGCATGTTGTTTACCTGGTGATGTTTCTTGGAGCTTGTGGAATTTTTCTTGGATATATGTTTCGTCTGAGCTGTTTTTCATTCATGATAACTTATTGGTACATTTTTCTGTTGGAGAAGGCACGCTGGAATAACCATTCATATCTGTATGGATTGATCTCATTTATGCTTCTCTTGAGTGATGCCAATCGTTACTGGTCTTTGGATGGATATTTTAACCCAGAAATAAAGAATTCTCATGTTCCAAAGTGGAACTACGTTCTGCTGCGCTTTCAGGTGTTTCTTGTGTACTTCTACGCTGGCCTGAAAAAGCTCGACTTAGACTGGATGAGAGGATATTCCATGACCGGACTTTCTCGTGAATGGGTTTTTGATCCATTCCGCATTTTCCTTGATGACCAAACAATAGACCTGTTTCTTGTTCATATTGGTGGATTGGTGTTTGATCTGTCAGAGGGCTTTCTTCTCATTTTTGACAAGACCCGGCCCATTGGAATATTCTTCGGTGCAATGTTCCATGGTATGAATTCTCAGATGTTTAACATTGGAATGTTTTCATACACTATGCTGGCAACGCTGCCCCTGTTCTGCGCTTACAACTGGCCTAAGAAGCTGCTTTCTCGCCTCCCTAACTTCACGGCTAAGATACTACCATCACCGGAAGATCCTCAAACCAGCAAACACTGTGTGTACCCAGAAATTGCCAAGGGGCCAGGCAGGGAAGAACAGAgtgataaaaagaaaatgtcaaAGAGATGTCAAGCACCCGCTGCCAAGCACAAGGCTTCAGTGTTTATGGTTCTTATTTACATAGTAATTCAGCTGTTCCTCCCATATTCACACTTTGTTACAAAGGGCTATAATGCTTGGACCCAGGGTCTATATGGCTACTCTTGGGACATGATGGTGCATTCCTGGAGTACACAACATGTCAGGGTCAAAGTAGTGGACCAGGTGTCAGGGGAGGTCACTTATATAAGGCCCTCGGCGTGGCTAAGAGAGCAGCGGCAGTCCCGATGGAATTCCCATCCAGATATGATCAAACAGTACACGGCCTGCATGGCAGAAAAGCTGAAGGCCTTCGAAGAACTTAACATCACGGAGCCCGCGATTTATCTGGACGTGTGGCGCTCAATGAACAAACGCTTCCAACAGCGCATGGTTGATCCAAATGTCGACATGGTCAAGGCCCCATGGTCTCCATGGCGACAGACGCCTTGGATACAGCCGTTACTAACAGAGCTGTCGCCGTGGCGGGAGAAGTTGATTCAGATTAGAAGGGAGTTGAAGGAGAAGTCTAACTTCAGTGAGATCACGTTTGTTGCCGATTTTCCAGGGctttttttggaaaactttgTGGCTGAAGAGTTGAACACCTCCTTGACTTTGTTACATGGGCAAGTCAAGGTGGAGTTTAACAATACAAATCACACTTTAGAAGTTGGTGAAGAAATCTCTGTCCCGTCAAACGACACGCACTTGGTGTACACGGTATCAGACACTCCTTCTTGCTGGATGTACATCTTCATGAACACTACAGAGTGGAACAACGAAACCATCAGGAACTGGATTCTGCACCCGGAAACTTCCCCGGGCAAGCAGAAAAAAATGTCTTGGGAAAACACAACACTcttggaaaagtttaaaatatttGCTACGGACAAATACTACATTTTCCGCCAAAGTTTTATGAACACTTACTACGCTCTGGCCCATTTGACTCTTGGGATTGAGCCACCGATGGAAAGTGACGAAGAGGATGACGGCAGTTCTACCGAGCAGGAGACTGGAGGCGAAACAGACCAGGGGATGAGTGATGGAGATACTTCAACACATGATGACGACGCAGGTCACGTGGATAGAGAAGCGGGGACACGTGATCAGGGAACTGGCCAGGAGGATAACACGCAAGGAAAAGAACACGATAAACAGGAACTGTAAACGAAATCAAACGGGAAAAGTGGCTGACAGTACACAAGAAAAATTGCCCGTAATAACGAATTGAATGGATTAAAGAGGTCTACAACATAGGAAAATGTTCGTACGATCTTTCGTTCGAGCGAAAGGAATAGGCCGTTAATCATCAGTTTGAAAAGGTAGAAGACACATTTTTCTTCTCCTTCCCCCCCCCTTCCTTTTCGCACTTTCCCAGCTTCCTTTTTCGCACTTTCCTCAGCTTTTAAAATCATAATGGTCCAAACCATGTTCTTTCATAATGTCTTAGATCGCTTCGCGGAGCCCAAACAATGTCGCGCAGGCGTTGGAGGCTGAGATAAAATTGGCAAGAACTGATTTTGGCTCGTTTCTCCTTTAAAAAATACAAGTTCACTTCATGTCGTTTCCATGAAGGGCTAGAAGCCACTATCAATATTCTGCCTCGTACCAGGCGCTTCTTTTCCTAGGCGGGATTTTGACGAGGCGCAAGGGGTCATGCGAAAGCAGAGTCTTCCCTTAGTGCCTTGCGATCTCGAGTCAAAAACCTCAGAAGCGCCTGGGTGCGAGGCAGACTAATGTTTGAGTAAAGCATTAAGCAAACTTTGATGAAAAAGATAAGAAATTCTCCAAACTGGTACATTATAACG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05090 all species →	VKG_Carbox	Vitamin K-dependent gamma-carboxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011051 all species →	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR011020 all species →	Domain	HTTM	Interproscan
IPR007782 all species →	Family	Vitamin K-dependent gamma-carboxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12639 all species →	VITAMIN K-DEPENDENT GAMMA-CARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008488 all species →	Molecular Function	gamma-glutamyl carboxylase activity	Interproscan
GO:0017187 all species →	Biological Process	peptidyl-glutamic acid carboxylation	Interproscan
GO:0019842 all species →	Molecular Function	vitamin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10106	GGCX; vitamin K-dependent gamma-carboxylase	EC:4.1.1.90	Ubiquinone and other terpenoid-quinone biosynthesis	ko00130	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.