Gene detail

Detailed information of ENSTHXP00000037530.1 in Siderastrea radians

Genomic Location: chr8:10480368...10500568
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTHXT00000056159

ATGGACTGGCATCCATTCCAGGGTGAAAGGGACTTGGCTAAAGATGATGTTGTAGGACTCCAGGACACAAAGAACAGACTTACAACTCACATATCAGAGCTTGAACAGGAACTCAAGAGGGTCAAAATGGATGCAGAAAAGGCAACTGTTGCTTTAAAAGAGGCTAATGTTTCAGCAGCTCATCGTAAGAGGTTCACACGAGTTGAAATGGCTCGAGTGCTAATGGAGAGAAACCAATACAAGGAAAGACTGATGGAGCTTCAAGAGGCTGTGAGATGGACAGAAATGATCAGagCATCAAAAGAGAGAAACCTTGAATTACAACAGAAGAAGAAATCATCCATTTGGAAAttTTTCAGCAACCTGTTTGGTCCATCTCCAAAGAAACCTGCCCCTCCCATGGTCAGTATTAGGTATAACTCCCCTCAGGGGGAGGGAGAGAAATCTCCTACCTCTAGACGTAGTAACTCTGTGGATTCAGGATCTGCTGGTGCTGTAGCCTTGGCTAGTGGTGGTGGATTTGGCAGTGAAAACTTTGACAGGCAGCGTCTTGTGGAAAGAAGAGAGCGCTACAGACAAGTTAGAGCATTTCTTAACTCAGATGTTGCAGAGGGTCGCATGCAAGCTTATGGCTGGAGCCTTCCTGCCAAATATTCAACAGAAGTTGCAGAGGGAGGGAAAAGCCTTGTTTCAGTTCCTGTGCCTGTTTATTGCCGACCACTTAATCTTAATGACCCAGGAATGAAAATATGGTGTGCCGCTGGTGTAGACCTGTCAGGTGGTAGAACACAAGATGGTGGCTCAGCCATTGGTGCCAGCAGTGTATTTTACACAGACAGTGCTCGTGAGCAGGAAGAGGGAGCAACAGACCAAAAGACTGATGCTAAAGTGTCCATGGTTTGGATTGGCAGTAGCACACACTCCTGCAGCAAGGTTACTGTGGTGGATGCTAACTACCCTCAGAACATCTTGGATTGCTTCATAGTGTGCACATCACACCTGTTGTGCATTACAGCAGTCCCTGGTGCATCAGAAGGAGATTATCAAGGCTCAGAATGGACTCTTGAAGATCCACTGCAggcaaacaaagagaaaaaggaCTCCACGGGAAGTTCAGGAGGTGTGGTATTCAGTGATCCACTAGGTGTACAGACAGCTCAGGGACAAGGACAAGATGGTCCAACAGTAACAGACATAACAGCTGGAGAGAATGTGCCCACAGGAGCTGGACAGGTGGATGGAATGGAGAAAATGAGCAGTGTACTACCAACCATGTGGCTTGGGGCACAGTCAGGCTGcGTGTATGTACACTCTGCCGTATCTGACTGGAAGAAATGTATTCACTCCATCAGATTGAAAGACTCTGTGCTTAGTATAGTATATGTCAATGCCCGTGTTCTAGTTGCCCTTGCTGATGGCACTATTGCTATCTTCCATAGAGCTTCTGATGGGCAGTGGAACTTTAACAACTATCACCTGCTGGACCTTGGACGGCCGCACCACTCCATACGCTGTATGAGTGTTGTACATGATAAAGTGTGGTGTGGCTACCGTAATAAGATCCAAGTTATACACCCACGGAGCATGAAGGTGGAGAAAACCTTTGATGCTCATCCTCGGCGTGAGAGCCAGGTTCGGCAGTTGGCTTGGATAGGAGATGGTGTTTGGGTGTCCATTCGACTGGATAGTACGCTAAGACTTTACAATGCCCATTCATACCACCATCTGCAGGACATTGATATTGAGCCTTATGTCAGCAGGATGCTCGgtaCCAGCAAATTAGGCTTCTCCTTTGTTCGTATCACATCGCTAATGCTCACCAATGACCGTCTTTGGGTGGGAACCGGAAATGGCGTCATACTATCTGTACCTCTTGTGGCTGCGCGTCCTGCAAAGGATGATGGTGAAACAAGTTCCCCAGGGACGGGAGGGACAGGCGGTCCTGGAGGAGCCGTCCGGGTATACAGTAATGAAGGCAAAGATGGGGAAGCTCCTAGGGGGGCTAGCTTTATGCCCTATTGTTCTATGGTAAATGCCCAGCTTTCATTTCACGGTCACCGAGACTCAGTCAAGTTCTTTGTAGCCGTACCAGGCTCCATGAAGAGAATATCCCAGCCGGCTTCATCCAACAGATCAGCTAGTCCCAGTGGACTCTCGGTCAGGTCCAGCCCAGAGAAGACTGTGACCGAGGCCATGCTGTTGGTGTTGTCAGGAGGGGAAGGGTACGTGGACTTCCGGTTAGGAGACAACGAGGAGACTGCGCTGGAGGAACAAGGAGGTGACTTGATATCTGTCACGACACGTGGTCAATCAACCAATGAGAGAAGCCATATCATGGTTTGGCAGGTGTCAGTCACGTGA

Transcript

ENSTHXT00000056159

AGCAAAAGTTGAACCATGGTAATCAGCCTTAAGGAAAGATGCTTGTCTGCCACCAGGGCAgaattttgcttaatttatgTACATTTTCTTAACGTTAGCTTCTTTTCTGGACTTTCAATCTGAAATACGGTAACTTCTGTCCTTGTGTTTGCTgtcatgttgttttttttgctaGAAAGAACTTTTCAccgcattgtctctctctaaCCAGGCATATTTTTGGGTTCCAGTAAACCATTAAAAGTATCCAACAAAATGTGATGAACTTAACTTGGCAATGGACTGGCATCCATTCCAGGGTGAAAGGGACTTGGCTAAAGATGATGTTGTAGGACTCCAGGACACAAAGAACAGACTTACAACTCACATATCAGAGCTTGAACAGGAACTCAAGAGGGTCAAAATGGATGCAGAAAAGGCAACTGTTGCTTTAAAAGAGGCTAATGTTTCAGCAGCTCATCGTAAGAGGTTCACACGAGTTGAAATGGCTCGAGTGCTAATGGAGAGAAACCAATACAAGGAAAGACTGATGGAGCTTCAAGAGGCTGTGAGATGGACAGAAATGATCAGagCATCAAAAGAGAGAAACCTTGAATTACAACAGAAGAAGAAATCATCCATTTGGAAAttTTTCAGCAACCTGTTTGGTCCATCTCCAAAGAAACCTGCCCCTCCCATGGTCAGTATTAGGTATAACTCCCCTCAGGGGGAGGGAGAGAAATCTCCTACCTCTAGACGTAGTAACTCTGTGGATTCAGGATCTGCTGGTGCTGTAGCCTTGGCTAGTGGTGGTGGATTTGGCAGTGAAAACTTTGACAGGCAGCGTCTTGTGGAAAGAAGAGAGCGCTACAGACAAGTTAGAGCATTTCTTAACTCAGATGTTGCAGAGGGTCGCATGCAAGCTTATGGCTGGAGCCTTCCTGCCAAATATTCAACAGAAGTTGCAGAGGGAGGGAAAAGCCTTGTTTCAGTTCCTGTGCCTGTTTATTGCCGACCACTTAATCTTAATGACCCAGGAATGAAAATATGGTGTGCCGCTGGTGTAGACCTGTCAGGTGGTAGAACACAAGATGGTGGCTCAGCCATTGGTGCCAGCAGTGTATTTTACACAGACAGTGCTCGTGAGCAGGAAGAGGGAGCAACAGACCAAAAGACTGATGCTAAAGTGTCCATGGTTTGGATTGGCAGTAGCACACACTCCTGCAGCAAGGTTACTGTGGTGGATGCTAACTACCCTCAGAACATCTTGGATTGCTTCATAGTGTGCACATCACACCTGTTGTGCATTACAGCAGTCCCTGGTGCATCAGAAGGAGATTATCAAGGCTCAGAATGGACTCTTGAAGATCCACTGCAggcaaacaaagagaaaaaggaCTCCACGGGAAGTTCAGGAGGTGTGGTATTCAGTGATCCACTAGGTGTACAGACAGCTCAGGGACAAGGACAAGATGGTCCAACAGTAACAGACATAACAGCTGGAGAGAATGTGCCCACAGGAGCTGGACAGGTGGATGGAATGGAGAAAATGAGCAGTGTACTACCAACCATGTGGCTTGGGGCACAGTCAGGCTGcGTGTATGTACACTCTGCCGTATCTGACTGGAAGAAATGTATTCACTCCATCAGATTGAAAGACTCTGTGCTTAGTATAGTATATGTCAATGCCCGTGTTCTAGTTGCCCTTGCTGATGGCACTATTGCTATCTTCCATAGAGCTTCTGATGGGCAGTGGAACTTTAACAACTATCACCTGCTGGACCTTGGACGGCCGCACCACTCCATACGCTGTATGAGTGTTGTACATGATAAAGTGTGGTGTGGCTACCGTAATAAGATCCAAGTTATACACCCACGGAGCATGAAGGTGGAGAAAACCTTTGATGCTCATCCTCGGCGTGAGAGCCAGGTTCGGCAGTTGGCTTGGATAGGAGATGGTGTTTGGGTGTCCATTCGACTGGATAGTACGCTAAGACTTTACAATGCCCATTCATACCACCATCTGCAGGACATTGATATTGAGCCTTATGTCAGCAGGATGCTCGgtaCCAGCAAATTAGGCTTCTCCTTTGTTCGTATCACATCGCTAATGCTCACCAATGACCGTCTTTGGGTGGGAACCGGAAATGGCGTCATACTATCTGTACCTCTTGTGGCTGCGCGTCCTGCAAAGGATGATGGTGAAACAAGTTCCCCAGGGACGGGAGGGACAGGCGGTCCTGGAGGAGCCGTCCGGGTATACAGTAATGAAGGCAAAGATGGGGAAGCTCCTAGGGGGGCTAGCTTTATGCCCTATTGTTCTATGGTAAATGCCCAGCTTTCATTTCACGGTCACCGAGACTCAGTCAAGTTCTTTGTAGCCGTACCAGGCTCCATGAAGAGAATATCCCAGCCGGCTTCATCCAACAGATCAGCTAGTCCCAGTGGACTCTCGGTCAGGTCCAGCCCAGAGAAGACTGTGACCGAGGCCATGCTGTTGGTGTTGTCAGGAGGGGAAGGGTACGTGGACTTCCGGTTAGGAGACAACGAGGAGACTGCGCTGGAGGAACAAGGAGGTGACTTGATATCTGTCACGACACGTGGTCAATCAACCAATGAGAGAAGCCATATCATGGTTTGGCAGGTGTCAGTCACGTGATATCCTAGATTGCTCTTCTAGTGGAAAATTGTAGTAAATTTGCGCCACAGTTAAGCAATaatgaattttaatttcagCGGTTGCAGTGAAAAAGATGCAATTAGTGGCACGTTTATTGCTGTAGATAAAACAGACTGCAAACAGTCTCTCATTTTCTTCAGATACTGAAGTCGCTGCGAAGCAGTTCGCGGCTTTGTCGATCGCTGCTCGTAGTTCGCGCCCTTCTTCCATTACTTTCTTCAATACCTTAGAAGAAAAACGAGAGAATGATAGTAGTTTACAGATAAGAAAACCTTAGCGAAAGTAAGAGTAAGCCTTTATAATTGCTGTATTTTTGAAGCAGTTTTTATTTTGTAGATGAACAAAGTGCATTTATTTTCACAACATTGCTTTGTTAATTCCCAGTGCGCAGTTATGAAATACACCCAGTAGTAGGTCTCATTTTAGTATCTTTTGTAATGGTTTATGTTAAGTACTTGGTTGCAGTGGCGTGAATATTTGTAAATAAGTTCCTAATTAATTCTCAAAGTTGCAGAAAGTATTTTTGGTGGTAATTTAAATTACGAGCGCTATCTATTTTGTCATGCGGGTTTTCAACCTGTTGTTTACTGTGTAACGTATTACAAATCAAATATGTATGATATATAACAATGTGAATTTATGTCTA

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005017 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19056 all species →	WD40_2	WD40 repeated domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039911 all species →	Family	JNK-interacting protein 3/4	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR034744 all species →	Domain	RH2 domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13886 all species →	JNK/SAPK-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005078 all species →	Molecular Function	MAP-kinase scaffold activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0019894 all species →	Molecular Function	kinesin binding	Interproscan
GO:0030159 all species →	Molecular Function	signaling receptor complex adaptor activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20317	SPAG9, JIP4; c-Jun-amino-terminal kinase-interacting protein 4	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.