Gene detail

Detailed information of ENSTHXP00000041356.1 in Siderastrea radians

Genomic Location: chr1:39554842...39575532
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTHXT00000062708

ATGCTGGACATCTTGAGACATGAGGAAGATGGTCAAAGTGGCGGAACAACTGGGCCTTGTCTGGAATACTTACTACAACATAAAATTTTGGACACCCTTCATACACTGGGACGAGCAGATTGTCCTCCTGGGATGAAACAACAAGTACTGCTGTTTTTTGCAAATTTGCTGGCCAAGATGAAACAACCTCTTCTACCTCACATAAATGTGTACCGGCCAGTGCATAGACTAATTCGATTATGTGGTGAGGTAAAGGCTGCTCCATCTGAAAATGAAGAAATTCAATTCCTCTGTGTTGTCTGTGCAAAATTACGGCAGGATCCATACTTGGTCAACTTCTTTCTTGAGACAACCTCTGCTAGAACTACACTTGTCTTGCCATCTGGTGAGCAGCCGTCACTAGGTACAAGTCCAACTGGTTTGCATCCATCATCAGAAGAATTGCATCCCCCGCCTGTTAAAGCCCAAGGACGAGACAAGCCAGATTATACCCTGGTTAATTCTCTTCTCACCTTATCCAAGAGTGAGGACAGTAGAATAGCAGTGAAAGCTTGTGAAGGACTCATGCTTTGTGCATCCCTTCCTGAGGATCATGCAGCCACTGTAATTATCCTGTACACTCCTTTCTGTGAAGTCATGGCAGACAGATTGAAAGTGCTATTTGACCACTTACCAAAGAATATGGAGCCATTGGACATATCTGCTGTAGCTGCAAAGTGGGGACTTGATCATCAGAGTGATGATGAAGATGTGTTGGCATTTTCTGGCAAGAGGCAGTTGATCTCTTTTCTCTCCTGGTTGGATTATGTTGACCAGTTATCAAAGGAAGCCCACAAGCTTGTAGGCAAAGCATTAGCAGTAGGAGTAAGAGAAAGATTTCTTCAGGCAGTTATTGAACCAGGTCTCATTCAACAATCAGAGCTTGGCATTGTTACCACAACAGCTGTATTGAGAAGATGTGTAAAGGCTGTCACTTCACCCCAACTCCTCCAAGaaaTTTGTATGTTTCTCCTTGGTGAGGGGGTGGCACCAGAAATTCCATCTCATGTGGGAGACCACAAATTGCGACAAATTCTTATTGAAAGATGTGACCACTTGTCTGATGAGGTCAGCATAGAAACGTTGAAGCTATTTGAGGCATTGCTCAACAAATCTTgtgaaattattttaaataaccTTGTTCTTCGAAACCTCAAGAGTAGAAAGTACTATTTGACACCTACAGTCACTAATGGAGGTACAACAAGCAATGGACCTGTGGTTGAAAATTTGGCACTGCCCTCACCTGCCACAGGAATACCACCATCACCAACATCACCCTCAACTCCACCACTTACCCCAGATGGGCTGGGCTCACCACAGATTGTAGACAATGTTGAAAGAGAAGAAGTCGAACAAGTTGTAAATAGttttattTCCCTAGTACCTGACGAGATAAAGACATCAGCCCTTACAGGAGACACTGGTTATGACACTTATTTAAGAGATGCCCACAGACAGtgTAGCCAACGTGCTTTACAAACCAGCAGTTTTGACTGGCCCTCAACTCCTATCCCATCTCACAATGTGGAGGACAGCAGAGAAGAATTCTATGAAGGTGCATTTTTAAATATGCTCTTCAAGAAACTACAAAGACTACTAGATCAGCCATATGATGTGAACCTACAAGTAACAAGTGTGATAGCGCTGTTGACTCAGTTTAAGCATCCCCAGCTGCAAGAATATCTCCTCAATGGCACCTTGACACTCGCAAAAGACTGCCGCTCCCTTCACTTGACTCTTCAAAATGTTGTACAAGATTTAAGAGGTAGAATACAAAGACTTCCAAACTTTCAGCGAAATGTTATCGCTGTCAGGAGACAGTTAATGGGAATGGCAACATCACCCGAACACAAGAGTCTCAGTGAAAGCAACCTTTTAGAAGCTGCGATAGTGTTAGAGGAATTTTGTAAGGAATTGGCTGCCATTGCATTTGTGAAAGCTACAGAGAGAGTACAAAGTCGGTGA

Transcript

ENSTHXT00000062708

attcaaaatggcgtaaATGTTTTGATAGAAAGTGATTTGCTATTAGCTTTTATAGCGATAATATTCTTTTTTAGGCCTGGTAGAAATGTTTCataaaataagatcttttatCCATGAAGCTGTCGAAGCGATGAGAAAGTTCCTGTGCAATCCACGAATATTCCTTATCATTTGGAACAAATGCTGGACATCTTGAGACATGAGGAAGATGGTCAAAGTGGCGGAACAACTGGGCCTTGTCTGGAATACTTACTACAACATAAAATTTTGGACACCCTTCATACACTGGGACGAGCAGATTGTCCTCCTGGGATGAAACAACAAGTACTGCTGTTTTTTGCAAATTTGCTGGCCAAGATGAAACAACCTCTTCTACCTCACATAAATGTGTACCGGCCAGTGCATAGACTAATTCGATTATGTGGTGAGGTAAAGGCTGCTCCATCTGAAAATGAAGAAATTCAATTCCTCTGTGTTGTCTGTGCAAAATTACGGCAGGATCCATACTTGGTCAACTTCTTTCTTGAGACAACCTCTGCTAGAACTACACTTGTCTTGCCATCTGGTGAGCAGCCGTCACTAGGTACAAGTCCAACTGGTTTGCATCCATCATCAGAAGAATTGCATCCCCCGCCTGTTAAAGCCCAAGGACGAGACAAGCCAGATTATACCCTGGTTAATTCTCTTCTCACCTTATCCAAGAGTGAGGACAGTAGAATAGCAGTGAAAGCTTGTGAAGGACTCATGCTTTGTGCATCCCTTCCTGAGGATCATGCAGCCACTGTAATTATCCTGTACACTCCTTTCTGTGAAGTCATGGCAGACAGATTGAAAGTGCTATTTGACCACTTACCAAAGAATATGGAGCCATTGGACATATCTGCTGTAGCTGCAAAGTGGGGACTTGATCATCAGAGTGATGATGAAGATGTGTTGGCATTTTCTGGCAAGAGGCAGTTGATCTCTTTTCTCTCCTGGTTGGATTATGTTGACCAGTTATCAAAGGAAGCCCACAAGCTTGTAGGCAAAGCATTAGCAGTAGGAGTAAGAGAAAGATTTCTTCAGGCAGTTATTGAACCAGGTCTCATTCAACAATCAGAGCTTGGCATTGTTACCACAACAGCTGTATTGAGAAGATGTGTAAAGGCTGTCACTTCACCCCAACTCCTCCAAGaaaTTTGTATGTTTCTCCTTGGTGAGGGGGTGGCACCAGAAATTCCATCTCATGTGGGAGACCACAAATTGCGACAAATTCTTATTGAAAGATGTGACCACTTGTCTGATGAGGTCAGCATAGAAACGTTGAAGCTATTTGAGGCATTGCTCAACAAATCTTgtgaaattattttaaataaccTTGTTCTTCGAAACCTCAAGAGTAGAAAGTACTATTTGACACCTACAGTCACTAATGGAGGTACAACAAGCAATGGACCTGTGGTTGAAAATTTGGCACTGCCCTCACCTGCCACAGGAATACCACCATCACCAACATCACCCTCAACTCCACCACTTACCCCAGATGGGCTGGGCTCACCACAGATTGTAGACAATGTTGAAAGAGAAGAAGTCGAACAAGTTGTAAATAGttttattTCCCTAGTACCTGACGAGATAAAGACATCAGCCCTTACAGGAGACACTGGTTATGACACTTATTTAAGAGATGCCCACAGACAGtgTAGCCAACGTGCTTTACAAACCAGCAGTTTTGACTGGCCCTCAACTCCTATCCCATCTCACAATGTGGAGGACAGCAGAGAAGAATTCTATGAAGGTGCATTTTTAAATATGCTCTTCAAGAAACTACAAAGACTACTAGATCAGCCATATGATGTGAACCTACAAGTAACAAGTGTGATAGCGCTGTTGACTCAGTTTAAGCATCCCCAGCTGCAAGAATATCTCCTCAATGGCACCTTGACACTCGCAAAAGACTGCCGCTCCCTTCACTTGACTCTTCAAAATGTTGTACAAGATTTAAGAGGTAGAATACAAAGACTTCCAAACTTTCAGCGAAATGTTATCGCTGTCAGGAGACAGTTAATGGGAATGGCAACATCACCCGAACACAAGAGTCTCAGTGAAAGCAACCTTTTAGAAGCTGCGATAGTGTTAGAGGAATTTTGTAAGGAATTGGCTGCCATTGCATTTGTGAAAGCTACAGAGAGAGTACAAAGTCGGTGACATGGCTACGTTTGACACTTAAAGGTAAAGCATACATGCAGGGTAACCAACAATGGGTCTCAGACTTGCTTCGTTCCTGAAGATATTGTAACCTCGCAAATGTGATGTCAAGCTGTAACTTATGGCTTCATTCTATCAGCTGTAGGAATTCATCACATCGCAGGAAGAGTTTGCTTGGTGTTGGATCAAACACAGGCATTAATTCACTTTGACACTTTTTGTGAAGACTGAAACTTTGCTTTGAAGTGTGTATTCTTAAGAGGATTTTGGCAtctgaagtttctttttaaactGCAACATGTTTAAATATCACTGGTGCAAGCTGCTTAAACTGGATGTCAAGTGTAAATTAACAATTTTGTTATAATGGTTATTTCAAGTACTTATATTGTATTATGCAACTGACATGCAGATACTTTTGTTTGGCAATCAGACCATCAGACCAAAGAATTCAATGTCTGGAGTACATAATACATTTGGTTGTTGCACAAATGATGTAGCCATAAATGGCTCCATCATAGTTGGAAATGGGGCAGCAGCATTTGCTGAGTTGTCTGATGTTTTTATTGGTTTTGGCACACAATGGTGTTTTCCTTGAAGacaaatagaacaaacaacattCTAGTTATCAACTGGATTTCcagttgtttcttttttacaaCTTTCAGAGTTCAAATAATAGAAGAGTAACATATATTATCATGAATTATATGACAGAAACATAGCCATGCCATATTAGGTGATGAATGAGTTAGAGAGATTGTAATAAAAAATACTCAGTGGGAAGTCGTTGAAGATTCTGTATTTGTTAAGATACCATAACTGAATCGCAGttttaacccattcactcccagagtcagttatggagacatttaaggtgcttctaacttttgagtctgtggatgaaatcctttggtgtgaccattcaaatgaaacctcctCAGGAGTACTTTCAgttggtactatttatatttaggtattttcccaaatgaaatttgg

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003413 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19314 all species →	DUF5917	Family of unknown function (DUF5917)	Family	Interproscan
PF19311 all species →	KELAA	KELAA motif	Motif	Interproscan
PF10257 all species →	RAI16-like	Retinoic acid induced 16-like protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045669 all species →	Domain	FHF complex subunit HOOK-interacting protein, C-terminal	Interproscan
IPR045668 all species →	Conserved_site	FHF complex subunit HOOK-interacting protein, KELAA motif	Interproscan
IPR019384 all species →	Family	FHF complex subunit HOOK interacting protein	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21705 all species →	RAI16 PROTEIN-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was recorded for ENSTHXP00000041356.1 in Siderastrea radians.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26421	FHIP2, FAM160B; FHF complex subunit HOOK interacting protein 2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.