Gene detail

Detailed information of ENSTHXP00000047078.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Sequence

CDS

Transcript

ENSTHXT00000069172

aactttttttctcCTGATTAGTTTCAGAAATTGAAGAGAATAAGATGAAGCTTTCTTTCTGACCGAAAATTGATCAAATCACACACAGTTCTGTTGTTCTCCCTGATCTCTCTCGTTCGATTTCCGAGCCAAATTTGAACGAACCAATGAAATCCACCAACATTTGTCACGTGGGATACGTAAAACATATCCCATGACACAGTGCGATAACGCAGTTCTCGAGTATGTTTACCAGAGATTTTTAGTAATCTTAGGGGGAAATCTGCTTATACCCAGAAATTTTCAATGCTAAAAGGATGACATTTGTTTTCCCGTCCATAAATGGCACGGAGAAGCCAAGAGAAAGGAGTGGGCATGCAGCGGTCCATTTTGATGGCTATGTAGTGGTTTGGGGAGGCTATTATCGCCATGGTCCTGAGGTTGCATTTCCAGGAGTTTATTTTGTGGCTGACAAATACCACCCAAGCAATGAGGTGTGGCTGTACTGTGTTGAGACGTCTACGTGGACACACATTGAAACAAGTGGAGAGGCACCCCCTCCAATGTCAGGCTCAACAGCTTGTGTTGTCGGCGGTAAATCAATGTATGTTTTTGCTGGACACCATGATGGCGGACCATCTTCCACTGTTTTCGTATTAGatttaaaaacatttgtttgGGAAAATATGACAAGCAGGATCAGAGGAAATCCTCCATCAGAAAGAGATAAATTGTGCTGTTGGACACACAATGATTTAATTCTATATTTTGGAGGATATGGAACAGCTCCTGACCCTGAGAGAGTGGACCAGTCCTGTGGATACTTTGCATTTAACACCAGCCTTGAGGAGCCATTTACAGACAATAGAGGATGGAACAGCCATTTGTATGTGTTGAATACAAGTAGTTTAACATGGAGCCAACCTGAAACAAAGGGTAGAGCACCCACACCTAGAGCAGCTCAGGCAGCTGCTAAACTCGGAAATATTGCCTATGTCTTTGGGGGAAGATTTATGGAACAACGAAGGAATGACTTGCACTCTCTCAACATGGACACTTTAGAGTGGAGTGGCAGTATTCCAACAACAGGAAATGTTCCTGAAGGGAGAACATGGCATTCTTTTTCTGCTGTAAGTGACAGACATTTGTTTCTCTATGGGGGCTTCAGCAACCAGGAGGAGGCCTTAGGTGATGCTTACATTTTAGATACTTCAACTCTGATTTGGTTTCAGCTGAGGGTCCCTTCAATTCAGGGCAAACCAGCAACTCGTATGTGGCATACAGCTTGCTGTACGTTTTCGCCAGgagaaattgttatttttggtGGTTGTACATCATCAGTGTTAGGAGATGAACCGggaCACACTGCCAGTATCCTGATTTTTAGGTTTACACCCCAGCCTCTAAATTGGTTATGTGCTGATACGGTTGTCAAGTACTATTCCACACTGCAGAAACAGCTTAAAACGCTTCCCAAAAATCTTTTAATGTCACTTTTCCTGCATCGAAGACTGAAAGCTGTTGGCAAGATGTGAATTTGACAAATACAGCTATCACGACTGTTACCCGAATGTGAAGAGGGAAATAGATTATCAATTCTGCTCAGTCAGCATTCGAGCAGTTTGGGATTCTAGATTGGCTAGTCTGTCTTTAAATCACTTCATCTTGGGGTAAAACAGGGTTAATGTTCACTCTAATGACTGCAAACAAAAACTTCAACTTTTTACTCATCAACCATGTTATATTAAACAATCTGGATAGTCACTGTGAgtgcaagcaaaaaaaaaagttctatAATTTTTTATCATGTAGAATATTGTAGAGCTAAGAAATTTCTTAGTAATTATTTAGAATTTAAATTATTTAATTTGCAGTACCACTGACAATTATCATAAAATGTCTACATGATATGTACTAGACTGCATTTCAaacttctctttttcttttcagttgtaaaattttaattaactCTAGCTGAATGTGGAGTATAAAGACGAATTCTTGGTTTTCCTGTTACCTTATTGCAGTCATGTTGGTGGGCACAAACAATGGACAGGTTGACCTACAACATACTAAGGATCCAAATTAGAAAATCAGTCCATTTGTGCCCCCAGAGCTATCATAGCAGCAAGCATCCTGCAGTGAAAGCAAAAGTGCGTGACACAAGCTGATTTTCAAGCGAAATTCAAGGGACCTCGACCCCTAGCATCCGAAATTGAAATCTGTTACCCATCCACCCATCCCTCCcccttttgaaagaaaataaagaccCATTTGTCATTTGAATCTATAAGCGGGGATTGGATGCAAGCCATCAAATACGGTGTGTACTCTACATGTTGTACCTTCTTGGGGATGTAACCAGACAGTGTAAATAGTGCATTCCAAtaattaaaagtaaataaaatataaatcaGTCTAAAtaccatttttaaaatgtttatccTAAATTGTCTAATAAACAGGTTGTCATAtcttattttgcaaaatgaaagaTTGTATTATTTTTACCGAACGTTTATGGTCAATACTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13418 all species →	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan
PF13854 all species →	Kelch_5	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052257 all species →	Family	Kelch domain-containing E3 ubiquitin-protein ligase complex component	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR011043 all species →	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46228 all species →	KELCH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25807	KLHDC2; kelch domain-containing protein 2	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.