Gene detail

Detailed information of ENSTHXP00000057776.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation SRADI · all data for this species · gene families

Sequence

CDS

ENSTHXT00000087137

atggcggacgacAACAACGAAATGTGTTCCCTCGTGTCTTTGCTTTCGCAGTTCGAAAACGCTTCCGATCACCCAGAAACGTACCTTAAACCTTCGTCTTCTCTTGAGAAGGAAAATATAAATATGGTGAAGCAAATATTTGATTTCTGCAAAAAAGATGAACCAAATGGTAGTCGCTCTTTTGCAAGCACGTGCCCGCTACAAGAGCTCCTTGTGGACGGATTTGATGTTGAGCAAATATGGCAAGAAATCGAGCTGCAAAATACTCCTCTGTTGAATCTCGGAAAACAAGACGTTCAGAGTGTTAAGCAAAACGCGGGAAAGCTTTCACTATTGTCAGCAAGGAGAGGTGATTTTGTCAAAGGAGATCAGTTGCAAGGCAGTGAAAATGGAATCGTTAGAGAAGATACCAGTGGATTTGTAAGACATGCATTGGGAAGTGAGTCAGAAAATGAAAGTATTGAGGATGAATCTAGTCATGGTGAAAATGGTGATGCCCCATCAGATGACGATtataatgacgatgatgatgatgagagtTCTAATAATGTTAACAATAAGAAAACAAACCTTGCTAGTaaagacaacaagaaacaaaaacctTCAACAAAAAAGTCTCAGGTAGATGACACTTTCTTTAAACTTTCTGAGATGCTTCAGTTTTTGGACAAAGAGGACAGAAGATTTGAAAGAGCAAACAAAAAGATAAACCAAAATgagaatgatgatgatgatgacgatgacgataaAGAGAGTGACAGTGAACTTATTGATTACTTTGTGGACATTGATAGTGACAACATGAATGAGGATGACGATGAGGACGATGATTGGAATAAAGCTCTTGGTGCTACAGAGTCACTTCTTGGAAGGAAGTTAACAAGAAAGGGCAAGAAGAAAGGAAAGTCTCCTGGGCAGGTGAAGTATGCCGActtctttgatcctcctgatggaaaaacaactggaaaagaAGGAAGTGGAAATGACAGTGAAGGTGAAGATGAGAATGAAGCTGATGAGATGGTAGCTGAAAATGAGGAAGATGAGGAAGAGGAATTCGAGGATGATGAAGTTGTCGCAAGTAGCAGTGAGGGGGAAATGGACAGTGATGAAGAGCAGCCTAAAACAATGTCCAGTTTTGAGAAGAAGCAACAGAAGCTGAATCAGAAAATTGAGAAGCTGGAAAAAGCCAACTTAGCTCAGAAATCCTGGCAGATGTCAGGCGAAGCAGGTGGCAGTGTGCGACCAATCAACAGCTTGCTGGAAGAAGATCTCAGCTTTGATCACACTACTACTGCTGCCCCAGATATAACAGAGGAAACAACTCAAAACCTTGAGGATATAGTGAAGCAAAGGATCAAAGATGAGGCATGGGATGATGTGGAACGAAAAGTGAAGCCTGTCACTGAGCCATATGAGTACAAGAAAAAATTACCACTGGACCAggaaaaaagcaaattgagcCTCAGTCAAATCTATGAACAAGAGTACCTCAAACAAACACAGGTGGAAGCTGAAGAGAAGGAAAACGAAGAGCACgaagaaatcaaaaaattaATGACCAAACTTTTCACCAGGCTAGACGCCTTGTCTAACTTTCATTTCACTCCGAAACCGGTAAAGCTTAAAATTGTAAGCAATGTGCCAGTGATATCAGTGGAAGAAGTCGCCCCAGTGTCTGTGAGCGATGCTATGATGTTGGCTCCTGAGGAAGTCcatgaaaggaagaaagaacaGATGGGAAGCACAGAAAAAACGGAGACTGATAGAAAGCGAGAACGGAGGGCTAAGAAACGAAGGCAGCACGAACGAGCTGTGGAAAGAGAGAAGCGGAGAAAACTCGTAGAGAAGCTTAACCCAGGTCTGGGAAACAAATATTCTAAAAAAGCAGCGCTGCAGAAATTGGAGAAAGATATTAAAACGTCGAAAAACGTGTCTGTGTTGAAAGACGAGGGAAATGGTAAACCCGTCAAATcatcttcagctttcttctctCGTCTTCAAGACGAGGCCCGGGATCAAGTCAGagcaaaaacagaaacaaagaaaaagaaagagaaatctGCAGTTAAAGTGACTCAGTTGAAACTCTAA

Transcript

ENSTHXT00000087137

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04006 all species →	Mpp10	Mpp10 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012173 all species →	Family	U3 small nucleolar ribonucleoprotein complex, subunit Mpp10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17039 all species →	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005732 all species →	Cellular Component	sno(s)RNA-containing ribonucleoprotein complex	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan
GO:0034457 all species →	Cellular Component	Mpp10 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14559	MPP10; U3 small nucleolar RNA-associated protein MPP10	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.