Gene detail

Detailed information of ENSTHXP00000062285.1 in Siderastrea radians

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Sequence

CDS

ENSTHXT00000094308

ATGGACCTGCAGGAATCATTACACAATGCTTCATCGATTTGTGATAGAGGCAGAAGaCAATTGGATCGTGCCAAGAGAGGAGTTTCTGTTGGCGGGTTAGGAATTTTAGCCAAACATCGCAAGAAGCAGCATCTTCTTATTCTCCTGGATTCTCTTAGGACAATAAAGACATTACAAAGGACAGATGTCAGGCTCAAGGAGATGCTTGAGGAAGAAGATTATCCGGGTGCTATTGATTTGTGTCTTGAGTGCGAGAAGGCAGCTCAAGCATTTAAGCACTACAGCTGTATAAGTGAACTGAGCTCCAATCTTCAAGAGACACTGATAGATATCGAGAAACAACTCGATGTGGCCCTGGGAAAGCTGTGTAAAAACTTCAATCCTGTGAATTATGAACGTCTGCTGACAGCCTACAGATACCTGGGCAAGACGGAGATAGCTCTGGATCAGCTGATTATACATTTCATGACAGCTATCAACCACGAATCATTTTCTGTCATTCTGGAACACGTTAAGGAATACCCTTCCGAGGCCATTTCTGAAGACAGTTTTCAGCATCTTCATTTTGAAGAGCAGTGCAAGAAAGTTGGTGCAGATCGTTTTACTCCTTGTTTGTTGGATCTTTGTAAGACGTTGTGGTCCTTCATGTTAAGCTATCACCAAATATACAAGTGGCATGAGCATTACGATCCCGCCATGCATCTGAACGCAGCCGAGCAGGAGGAGCCATCTGCTGAGGCAGCTTACAACAAAAATTACATTCAACAAAAACTCGATCATGGGCTAAATAGGATATGGAAGGAAGTCCAAGAGAGGATAAAAACTCATGTACTTGCAACTGATCTGTCGTATTTCAAATATGATGACTTCATCTACGTCTTAGATCTTGTAAACAGATTAATTGCTGTTGGTGAAGAATTCTGTAGCAGTACATCAGAAGATCTCCGTGAATCCATCAGAACACAAACTGTGAAATACTTCAAGACGTACCACAGGTCACGGATGGATGAACTACGCATGTTTCTTGAAAATGAAGCGTGGGAGTTATGTCCTGTCAAGGCATCATTCAAAATTGTCGATCTTTCAGAATTCCGTTTTATGAAGCACCAACAAGCTCATGTTAAGTCGCACAGAAGAACAGCTTCTGGAAACGTTCATGCCACCACAGACACAGGGTTCTTTTCACGCCACGCTACACACGGCAACCCATTTGATGATGTGTCTGTTGAAGACGAAGTTGAGGATGTCTTAGCAGAGAATGGAGACATTGTAGACGGTGACGTGaatgaaaatgagaaaagatccAGAGGACTTAGTCAAGATGATGACGAagaagatgatgaagatgaagatATTCCAGGTAAACATATTTCTCTTCACAACTTGGCTGAGACGTCCGCTAACAGCAGAAAACATCAGAAGTTTCTTTCCAAAGTTCCTTGTATCACCAACACAACGCTCAACGTTCTTAGAGTATTTGGTAGGTTTACACGAAATCTTACAGACCCAAAtgtcattatttttcattttaaccTACATGTATTGTATTTGTTGTGTGTTGTAGGTAAATACATGCAGATGATGAACGTTCTCAAGCCAATTGCCTTTGATGTGGTCATTTGCATGTCTCAGTTGTTCGATTACTATTTGTTTTCTGTCGCATCATTTTTTGCACCTGAGGTGATGGTTGATGGCAGTGCCCATGGTCTGAGCATTAAACTGAGAACAAGTTTAAAAAGAATCTCGGACAATCTTATTCAGCACGAGCAACCCTCTGAAATGATGAATGGTGGAAATGACATgaagGTTCTGCATCCTTACCTGTCAGGTCTTGTGGACCTCTCCCGCGTTGATACCATGTTTGGTTTGTCTGAGAGAATCATTGCCACGGAGTCATTagttttcTTGGCTGGGCAATTTGAATTTCTTCATGCTCATCTTGAAGCAATGATTCCTGTCAACAAGCGAGCATTTCTTTCTCAGTTTTACTCTCAGGTGAAATCCCAACTTGTTATTTCACATCTTTCACCAATGCGTGATCACTGTATCTCTCATACTGCCTGGGCTTCTTTTCCTACGGTATCTACTGCGCAGGAACTGAGGAGACCAGTGTATAGAAATGTGGCATCTCGGGTCATTGACTATGATCAGACGCTGCAGTTGATGACCGGAGTACGATGGGACATCCGGGATATAATGTCACAGCACAACGCCTATGTAGACATTCTCGTGCGGGAATTACAAGTTTTTAGTATGAGGCTGACCCAGTTAGCGAAACAAATTCCAGTACCACAGGAAGCTCGAACAGTATTATGGGATCATTGTGTTCGTCTTGTGAACAGAACCTTTGTGGAAGGGTTTGCGAGTGCCAAGAAATGCAGCAATGAGGGACGAGCATTGATGCAGCTTGATTTTCAGCAGTACCTTATGAAGCTAGAGAAACTAACGGATATAAGACCAATCCCTGACCGAGAGTTTGTGGAAACCTATGTAAAAGCATTCTACCTCACAGAAAATGAAATGGAAAGGTGGATTCGAGAACACAAGGAATACACAACCAAGCAGCTTACAAGTTTAGTCACGTGCGGTGTGGGTTCTCACGTgaccaaaaaaggaaaacaaaaacttttggCGATAATCGAGGACATGGAGCGCTCCAAACCTCGGTAA

Transcript

ENSTHXT00000094308

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10475 all species →	Vps54_N	Vacuolar-sorting protein 54, of GARP complex	Repeat	Interproscan
PF10474 all species →	Syndetin_C	Syndetin, C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019515 all species →	Domain	Vacuolar protein sorting-associated protein 54, N-terminal	Interproscan
IPR019514 all species →	Domain	Syndetin, C-terminal	Interproscan
IPR040047 all species →	Family	Syndetin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13258 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000149 all species →	Molecular Function	SNARE binding	Interproscan
GO:0032456 all species →	Biological Process	endocytic recycling	Interproscan
GO:0042147 all species →	Biological Process	retrograde transport, endosome to Golgi	Interproscan
GO:1990745 all species →	Cellular Component	EARP complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSTHXP00000062285.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.