Gene detail

Detailed information of ENSTHXP00000070001.1 in Siderastrea radians

Genomic Location: chr4:61265703...61280916
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSTHXT00000104309

GGTTCCCAGGGTCCCCTCCCTTTCTTGACGTGGAAGTAAAAAAAGATGGGGCCCTGGGAGCTATACATAAAGTAGGGACACTATAAGTATGCATACTTAACTCTCAATCCTAGCAACTTGTAATGGCATGGCAAGGAAGTAATGGCGGAAATAAGAAACGTTCGACTGAGATTTTCccaaacgaaaacgaaaaccGATATGAACTCAAGAAAGACTGATAGGATCTACCAGGGACGAAAAATTATTAGGTCTTAAACTCTTAGGAATTTGGTACGTTCTTCGTAAATATCTAACCGTAAATGTGTCGCTATTTATGGCGTGTTTGGAGGTCAACAAGAATGGACAATTTGAATTTTGCGGTAAGCTTATTCTTCGTAGCGGTAGCAGGATGGACCTCTGTTGACAGTTCTTTACCAAGAGATGGCATGAAAGGTCCTCCAAGCCCACCACGCAATTTAAGAAGAAGTGTTGTGGGTGTTTTAGGTCGTAACAGAGAATATAGGATATTTTGGTCCACTTCAAATGACCCTGGCGGTACAGCTGTCAACTACACTGTCAAATTGTGTGTAAATGACCCCATAGCCATTCATAATAATGTCTGCAGATGTAGCAGTAATTCTGACTGCCGACCGGCAGGCATTCTTAATACAAATGAGGATTTCTTCTGCATTTTGAAAAAGAGTGATTTTGGTCCATGTGGAGAGTTCTGCAACTATACTATTTGCGTAATAGCTTCAAATGATTTTGGGAATACTTCAACCTGCATCTCTGCGCCATATGTTGATGGAAATTTAGTCACTCCTCGACCTCCTCTTGGTTTCTCTGCTAAGATTGAGtctgagagaaatgaaataataGTGAGGTGGACAGTAAGAGATGCTTGGAGAGGTTATTCTCTTGTATACACAGTGTTATATCATGCAGAAAATCAGCCCAATAAGACCAAGGaagtggaaaacaaaacaactctTACAAAGCTGTCTGCACTGGAGGCATTTGTGGAGTATTGCATTTATTTGATGGTCCAATTGGTAAATAAAAATGGACTGAGGAGTGCGCATAGTGATGTGCTAGGACCTAAATGTTTAAAGACACTAGCTGGAGATCCTATCTCTCCGCCCAAGGTTGAATGGGATCACTCTGTAGTTTATCCAGACAATGCTGACCTGAGGAATGTTACAGTGGAATGGAAGCTGGCCGAAAAGTCGTCCTGGAAGGGGACTCCACATCAGTACCGTATATCATGTGATTACCGTCTTGTTGGCCGTGGAGCACTAGGAAAGAAATGTGAATATCACGAGAATGCGATATCAAATAGCACGGTATTGCAAGGACTCAACTCCGCAGACCGTTACAGTGTTTATATACAGATGTGCAATAAGGAAGGAAAATGTAGTGGCGAAGGAGAACCACATCTAATCTCGGAATTGCAAGACAACACACCCCAGCCAACAACAGACGGATCGCTGAGTGGCATGCAGATAGCGTTCATTGTGTTATCAGCATTACTCGGACTCGGAGTTCtattatttgttgttgttttcgtgTTCTTTCTTTGcAAATGGCGTCGAGAGGTGAAAATCAGGAAGTTAGGACTAAAACCCTTGGGAGATCGATTTGATTTGGATGATTCCAATGACTCGCATGATTACGAGCTAGCCGATTCAGGAAACGAGCACTCTTACGACCGTGTAGACACAAACGTCCATGAAGAGACTACTTAATGCGAAATCGACTGACGAGAGGAAAGATCAAGAGGATTCCGTCACGGAGTCAGCAAAGTTTTGTCCAAGACAAATCAGTTAATTGATAGGTGTTGAGTAGTCAGTTTTGCCGTCGATGCAGATGTCTCTCGACGAACTGATGTTTCTCAAATCTAACAAAATAATGGACTGAGCAGTTGGTTTTCGGTCTTATACCGGCGAAACTACCGCTTAAATATACGATGAAATAcaagtttttattttactttatttttattgtatttttaatcCAGTTTATCTCTTTACAGTGTAAAAGTACATTTTCTCTAAATTTCGCCTCGAAAAATGtgggaaaagaaaacacagcACCATAATAGCTTTTATGTGAAGGAAGTACCTAAGGAATTTTATTCATCATCACCTTTATTTATCTCGGTGATTAAGGCAACAAAGTGAGGCTTGTTTAAGATAAACTTATAGGTTTATAATAGTAGTAGGAATGAGAATAGTCACCACCTGTTGTAAAGGCTCTATCTACCCTCGGTGACAGGGCTTTTGCGGCGGCTGCGCCTAAATTATGGAACCAGCTACCGTCAGAACTAAGGAGAATCACTTTCATCGATCATTTTAACCGAGCTCtgaagacatatctttttaaacAAGCTTTTTATTAGTGTACAGATATATGTAttcttaatttttaatttgtaatctaaattttattttattttttaatctattttttatctaattttttaatttatatttgtaacgcgcatttgaaaacctatgttgaatttgcgcgctataaatgcatattattattattattaagagtCAAATTCGGTCTGAAGTCATACAAGCGGCTAAAGCATAAGTCCAATTTGTTTCATCACGAGAATGACTACAGAGCTGAGCTGTAattaaaatataatataataaaatataaaatatataaaatatattatGGAACAGTGAACGTAGGTGCTTCCTAAatcgtttcctttattttctgtTATC

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003902 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09294 all species →	Interfer-bind	Interferon-alpha/beta receptor, fibronectin type III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015373 all species →	Domain	Interferon/interleukin receptor domain	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

No PANTHER signature was recorded for ENSTHXP00000070001.1 in Siderastrea radians.

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05066	CSF2RA, GMCSFR, CD116; granulocyte-macrophage colony-stimulating factor receptor alpha	-	CD molecules	ko04090	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.