Gene detail

Detailed information of ENSTHXP00000072290.1 in Siderastrea radians

Genomic Location: chr4:68464462...68490611
NR annotation: no NCBI-NR hit recorded
Species Siderastrea radians · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSTHXT00000107011

ATGGCCACACGGTTGGCATTTTGGTTCATATTTAGCGTATTTTGTGCGCCATTTCTTTATGCAAACTTATTGCAAAAACCGCAAATCACCCGGGTGGAATCTGCAGCCTACGACGAACTTTACGCTGATGCAAAACACGCATACAGCCTCGAAAAGTGGAACGAAGCTGTGGAGCTCTTCGAGAAAGCTATCGCCGATTACAAACACGAGAAAGAAGTGAAAATTCACTGCAGATCGCGATGTCGCGATAAATACCGAGCTTCTTCGTCTCATAACTTGATCAGTGATCCAGAGCTAGACTACTACCGTTACACGATATATTCACACAAGTGCTCGCAACAGTGCAGAGAAAAATATCTTGGAAAAAGGAGCAAAGTTTCTGCAGCGGTGAAGAGGGACTTTGAATCGAGGTTAACGTATGGATACCTCCAATTCGCGTACTACAAGGCAGGAAGGACGATAGATGCTGCTAGAGCAGCATACACTTGCACAGAAACCCAAGCACAGGACAAAACCATGGCTGACAATGTCAAGATCTACAAGAATATGCCTGGTGTTGAAGAAGCTGGCATCTACTCTTTAGAACCCACTTTACACCAGGAGAGCTACTTCAACGCTGTTAAGCTATATGAAGAGGAACAACATGATGAGGCCATTCGGGGATTCGAAGACGCCTTGATGGAGTATTTCACCGCATATGAAAATTGCAAGATTATGTGCGAAGAAGAGCGAGAACAGAACAAGATTTTAAGCAGGTCTGGCTTGTTCGGTGTCCATGTTGATGTTTTGGAATGTTGCACCAGGTGCCCCGATCAGCTAAGGAGAGTCAAGGGGATTTATGTGAAAAACTACCTTGCAAGACATTATAATTATCTTCAGATGGCTTACTTTAAAGTGGAGAAGTTATGGGAAGCTGCTGGTTGTGCTGCGTCCTATCTGCTGCTTGATCCTGATGAGGATACCATGATTGACAACTTGCGATACTTCAAACATGAACTGGGGCATGACAGCATTAAAATAACAGCAAGAAAGGCAGCAATTCGTTATTATAAAGAGACAACAACAGAGCAAAAGCTGCTGCAAATGGCCAAAATTTATATGTCTGAGGCAGATTTTGATGACAGCGATGAATGGTTTCATGATGGAATAGAGGATGAGCCAGACAAACAGGAAATTAACATCGAGGACTTGATGCAAGATGACGAGCATAGTTACAGTGTTGAGAAACTTTGGGGCCTGGGTCCTATCAAGAAAGAAACACCCGTTGAGAATCCGCAAGATGTAGTTAACTTGGATCGATACAAGGGATCAAAGGTTTTAATGACAGAGAAAGACTTGAATGGAACCTTCAGGGTTGCAGTTGAAGGGATGGCAACAGAGGAGCAGTGTAAAATGCTGATTAAATTAGCTGAGAAGACAGCTAGACTGGGAGATGGCTACGACAATAGAAACACTGAAGACAAGCCGTTTTCTTTCACTGACAAAGAAACCTTTTCTGGCGTCACGATACTCTCTGCTTCGGAGGCAGCTCTTAAGAAGAAGGCAACCGTGGAAGAAGTGGAACTGTACTTCAACTTGAGTGAAAAACTCCGCCATTTCACAGAAGATTATTTTCAACTGGAGACACCGCTATACTTTTCGTATACTCATCTTGTTTGTCGAACCTCGATTCTGGatcCCAAAGCACCTGAAAAAGAATTCCACTTGAGCCACCCGATTCACTCGGACAACTGTTTACTTCACCGAGATGGTCTGGGCACGTGTCCCAAGAGATCACCAGCTTACACTTGGAGGGACTTCAGGTATGATAAACAAAACCTATTAGGAAACTCATTCTTATTTTATTATGTTAATTCCCAGGCTAAGCTCAAACCAGAATGTGGACGAGCCGTAGCTTTTTCAGCCGGACTGGAGAATCTACACGGAGTTGCTGGAATACGTGAGGGTCGCAGGTGTGCCCTGGCTTTGTGGTTCACTTTACGACAGAAATATGACGAGACACAACGTCAAGTAGCTTGGGGGATTCTCCAACAGGCAAAGGAACAAAAACGAGTTGAGGAGATGCCTCTCTTCACGCCTGAAGTAGCTACTCACGTGGAACTTTAG

Transcript

ENSTHXT00000107011

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003865 (this species only) · gene tree & orthology

Pfam domain

No Pfam domain signature was recorded for ENSTHXP00000072290.1 in Siderastrea radians.

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR039575 all species →	Family	Prolyl 3-hydroxylase	Interproscan
IPR006620 all species →	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14049 all species →	LEPRECAN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0032963 all species →	Biological Process	collagen metabolic process	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22459	P3H2; procollagen-proline 3-dioxygenase 2	EC:1.14.11.7	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.